Locus info | Cultivar Idenification | SNP info | Target on C. clementina (v1.0) | Target on C. unshiu (v1.0) | AGI map info (Shimada et al. 2014 Takehiko Shimada, Hiroshi Fujii, Tomoko Endo, Takanori Ueda, Aiko Sugiyama, Michiharu Nakano, Masayuki Kita, Terutaka Yoshioka, Tokuro Shimizu, Hirohisa Nesumi, Yoshinori Ikoma, Takaya Moriguchi, Mitsuo Omura (2014) Construction of a citrus framework genetic map anchored by 708 gene-based markers. Tree Genetics & Genomes. 10: 1001-1013. ) |
KmMg map info (Omura et al. 2003 Mitsuo Omura, Takanori Ueda, Masayuki Kita, Akira Komatsu, Yuko Takanokura, Takehiko Shimada, Tomoko Endo, Hirohisa Nesumi, ToshioYoshida (2003) EST mapping of Citrus. Proceedings of the International Society of Citriculture IX Congress 2000. 71-74. ) |
JtTr map info (Omura et al. 2003 Mitsuo Omura, Takanori Ueda, Masayuki Kita, Akira Komatsu, Yuko Takanokura, Takehiko Shimada, Tomoko Endo, Hirohisa Nesumi, ToshioYoshida (2003) EST mapping of Citrus. Proceedings of the International Society of Citriculture IX Congress 2000. 71-74. ) |
Km/O41 map info (Nakano et al. 2003 Mutsuko Nakano, Hirohisa Nesumi, Terutaka Yoshioka, Mitsuo Omura, Toshio Yoshida (2003) Linkage analysis between male sterility of citrus and STS markers. Proceedings of the International Society of Citriculture IX Congress 2000. 179-180 ) |
Rp/Sa map info (Ohta et al. 2011 Satoshi Ohta, Tomoko Endo, Takehiko Shimada, Hiroshi Fujii, Tokuro Shimizu, Takeshi Kuniga, Terutaka Yoshioka, Hiroshisa Nesumi, Toshio Yoshida, Mitsuo Omura (2011) PCR primers for marker assisted backcrossing to introduce a CTV resistance gene from Poncirus trifoliata (L.) Raf. into citrus. Journal of the Japanese Society for Horticultural Science. 80: 295-307. ) |
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Locus name ▲▼ |
Locus name alias ▲▼ |
Rank hybrid cultivar ▲▼ |
Citrus collection O - |
Cultivar identifi- cation manual O - |
Ninomiya et al. 2015 Taizo Ninomiya, Takehiko Shimada, Tomoko Endo, Keisuke Nonaka, Mitsuo Omura, Hiroshi Fujii (2015) Development of Citrus Cultivar Identification by CAPS Markers and Parentage Analysis. Hort. Res. (Japan) 14: 127-133. O - |
Nonaka et al. 2017 Keisuke Nonaka, Hiroshi Fujii, Masayuki Kita, Takehiko Shimada, Tomoko Endo, Terutaka Yoshioka, Mituso Omura (2017) Identification and parentage analysis of citrus cultivars developed in Japan by CAPS Markers. The Horticulture Journal. 86: 208-221. O - |
Graphical map O - |
Genotype O - |
Fujii et al. 2013 Hiroshi Fujii, Takehiko Shimada, Keisuke Nonaka, Masayuki Kita, Takeshi Kuniga,Tomoko Endo, Yoshinori Ikoma, Mitsuo Omura (2013) High-throughput genotyping in citrus accessions using an SNP genotyping array. Tree Genetics & Genomes. 9: 145-153. ▲▼ |
Transcript ID ▲▼ |
Scaffold ▲▼ |
Start | End | Transcript ID ▲▼ |
Scaffold ▲▼ |
Start | End | Gene function ▲▼ |
AGI LG ▲▼ |
AGI cM | KmMg LG ▲▼ |
KmMg cM | JtTr LG ▲▼ |
JtTr cM | Km/O41 LG ▲▼ |
Km/O41 cM | Rp/Sa LG ▲▼ |
Rp/Sa cM |
Fb0103 | OOthers | O | - | - | - | - | - | SI155 | ![]() ![]() | scaffold_1 | 22758712 | 22761740 | ![]() | C_unshiu_00103 | 160138 | 163082 | GDP-L-galactose phosphorylase | AGI-01 | 30.703 | JtR-01S | 6.418 | |||||||
Gn0028 | DDominant marker | - | - | - | - | - | - | JtR-01S | 10.669 | |||||||||||||||||||
Al0029 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | ![]() | C_unshiu_00305 | 69938 | 73026 | Basic helix-loop-helix transcription factor | AGI-01 | 37.357 | JtR-01S | 50.000 | ||||||||||||
Lp0237 | Lp0237.k | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 25987803 | 25992258 | ![]() | C_unshiu_00066 | 112710 | 117006 | Pyrophosphate-energized vacuolar membrane proton pump | AGI-01 | 29.815 | KmG-01 | 13.444 | JtR-01S | 57.629 | NAT-01S | 8.967 | ||||
Al0407 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_1 | 26576059 | 26578193 | ![]() | C_unshiu_00131 | 121152 | 123183 | 60S ribosomal protein L7 | AGI-01 | 31.240 | KmG-01 | 15.673 | JtR-01S | 57.666 | RP-01 | 79.425 | ||||
If0008 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_1 | 26576059 | 26578193 | No | KmG-01 | 15.635 | JtR-01S | 57.666 | ||||||||||||
Mf0086 | AAvailable marker | O | - | - | - | O | O | SI220,SI315 | ![]() ![]() | scaffold_1 | 25592494 | 25593617 | ![]() | C_unshiu_00066 | 500992 | 501833 | 17.9 kDa class II heat shock protein | AGI-01 | 26.428 | KmG-01 | 19.692 | JtR-01S | 57.666 | RP-01 | 69.936 | |||
Ov0310 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48463395 | 48465325 | ![]() | C_unshiu_00026 | 334715 | 336716 | Lanatoside 15-O-acetylesterase | KmG-01 | 21.291 | JtR-01S | 61.287 | |||||||||
Ks9001 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24548109 | 24552107 | ![]() | C_unshiu_00047 | 475125 | 488565 | Inter-alpha-trypsin inhibitor heavy chain-related isoform 1 | AGI-01 | 27.192 | JtR-01S | 61.287 | |||||||||
Al0636 | AAvailable marker | O | - | - | O | O | O | SI313 | ![]() ![]() | scaffold_1 | 23776796 | 23782088 | ![]() | C_unshiu_00080 | 464290 | 469444 | WW domain-containing protein | AGI-01 | 27.489 | KmG-01 | 25.751 | JtR-01S | 63.210 | NAT-01S | 12.652 | RP-01 | 48.896 | |
If0216 | OOthers | O | - | - | - | - | - | SI174 | ![]() ![]() | scaffold_2 | 12876952 | 12881843 | ![]() | C_unshiu_01838 | 23594 | 31186 | Hypothetical protein | AGI-09 | 74.076 | KmG-01 | 26.420 | JtR-01S | 66.382 | RP-09 | 29.224 | |||
Al0209 | HDisagree on Clementine haploid genotype | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 18298599 | 18300295 | ![]() | C_unshiu_00548 | 168151 | 169460 | Hypothetical protein | KmG-01 | 37.230 | JtR-01S | 88.382 | ||||||||
Wy0008 | HDisagree on Clementine haploid genotype | O | - | - | - | - | - | ![]() ![]() | scaffold_1 | 9297360 | 9299641 | No | AGI-01 | 57.863 | KmG-01 | 43.003 | JtR-01S | 99.300 | ||||||||||
Mf0033 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_1 | 6227617 | 6228389 | ![]() | C_unshiu_00075 | 123779 | 124531 | Hypothetical protein | AGI-01 | 62.570 | KmG-01 | 46.353 | JtR-01S | 106.811 | NAT-01S | 77.905 | ||||
Al0639 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_5 | 41703787 | 41708779 | ![]() | C_unshiu_00009 | 874868 | 888901 | IQ calmodulin-binding motif protein | AGI-01 | 70.494 | KmG-01 | 48.992 | JtR-01S | 110.675 | NAT-01S | 94.639 | RP-01 | 28.746 | ||
Lp0019 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 20922631 | 20924709 | ![]() | C_unshiu_00622 | 28630 | 30583 | 50S ribosomal protein L29, chloroplastic | KmG-02 | 4.377 | JtR-02 | -6.938 | ||||||||
Al0401 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 13180567 | 13191638 | ![]() | C_unshiu_01698 | 39336 | 40206 | Hypothetical protein | KmG-02 | 26.204 | JtR-02 | -6.043 | NAT-02S | 22.960 | ||||||
Fb0365 | O | - | - | - | - | - | SI036,SI320 | ![]() ![]() | scaffold_7 | 20872462 | 20874659 | ![]() | C_unshiu_00098 | 264947 | 272086 | Hypothetical protein | AGI-02 | 31.596 | KmG-02 | JtR-02 | -4.953 | |||||||
Fb0133 | - | - | - | - | - | - | ![]() | C_unshiu_00195 | 140861 | 146843 | Hypothetical protein | AGI-02 | 39.589 | KmG-02 | 1.175 | JtR-02 | 1.082 | |||||||||||
Lp0140 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 32629908 | 32634194 | ![]() | C_unshiu_00070 | 393864 | 397918 | Universal stress protein A-like protein | KmG-02 | 12.229 | JtR-02 | 2.765 | RP-02 | 8.172 | ||||||
Mf0090 | AAvailable marker | - | O | - | - | O | O | ![]() ![]() | scaffold_7 | 17201236 | 17204282 | ![]() | C_unshiu_00421 | 196945 | 199790 | Actin | AGI-02 | 25.869 | KmG-02 | 11.182 | JtR-02 | 3.182 | RP-02 | 8.191 | ||||
Al0329 | AAvailable marker | O | - | - | - | O | O | SI185 | ![]() ![]() | scaffold_7 | 17201236 | 17204282 | ![]() | C_unshiu_00421 | 196945 | 199790 | Actin | AGI-02 | 25.162 | KmG-02 | 11.218 | JtR-02 | 7.174 | NAT-02S | 5.552 | RP-02 | 8.191 | |
Ov0306 | OOthers | - | - | - | - | - | - | SI382 | ![]() ![]() | scaffold_7 | 224443 | 227133 | No | AGI-02 | 79.663 | KmG-02 | 72.516 | JtR-02 | 8.671 | NAT-02S | 60.000 | |||||||
Fb0995 | OOthers | O | - | - | - | - | - | SI026 | ![]() ![]() | scaffold_7 | 1180019 | 1202408 | ![]() | C_unshiu_00544 | 97318 | 121662 | FAT domain-containing protein | AGI-02 | 74.555 | KmG-02 | 82.954 | JtR-02 | 10.215 | |||||
If0010 | AAvailable marker | O | - | - | - | O | - | ![]() ![]() | scaffold_7 | 1264965 | 1266960 | ![]() | C_unshiu_00218 | 63403 | 65018 | 60S ribosomal protein L8 | AGI-02 | 73.759 | KmG-02 | 76.687 | JtR-02 | 10.849 | NAT-02S | 71.041 | ||||
If0223 | AAvailable marker | - | - | - | - | O | O | No | AGI-02 | 76.168 | KmG-07 | 43.554 | JtR-02 | 13.208 | NAT-02S | 71.420 | ||||||||||||
Gn0004 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 6011523 | 6014015 | ![]() | C_unshiu_00696 | 122646 | 125456 | Flavonol synthase | AGI-02 | 49.699 | KmG-02 | 38.471 | JtR-02 | 15.126 | |||||||
Al0210 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 6747139 | 6750382 | ![]() | C_unshiu_00166 | 205256 | 208771 | Eukaryotic initiation factor 4A-10 | KmG-02 | 34.998 | JtR-02 | 15.126 | ||||||||
Al0620 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 7796591 | 7799786 | ![]() | C_unshiu_01633 | 9442 | 11959 | Hypothetical protein | KmG-02 | 36.964 | JtR-02 | 17.013 | ||||||||
Lp0108 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_7 | 5554619 | 5556993 | ![]() | C_unshiu_00761 | 18704 | 21072 | 40S ribosomal protein S6 | KmG-02 | 41.508 | JtR-02 | 18.351 | ||||||||
Ov0015 | OOthers | O | - | - | - | - | - | SI304 | ![]() ![]() | scaffold_7 | 8255046 | 8256442 | ![]() | C_unshiu_02827 | 15986 | 17224 | Stem 28 kDa glycoprotein | AGI-02 | 34.494 | KmG-02 | 35.126 | JtR-02 | 19.319 | |||||
Vt0015 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2441452 | 2443391 | ![]() | C_unshiu_00025 | 381829 | 383760 | Hexosyltransferase | AGI-02 | 70.082 | KmG-02 | 67.054 | JtR-02 | 21.082 | |||||||
Lp0118 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() | C_unshiu_00008 | 46363 | 54318 | Protein trichome birefringence-like 33 | AGI-02 | 73.759 | KmG-02 | 75.522 | JtR-02 | 24.745 | ||||||||||
Lp0040 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 3674156 | 3676384 | ![]() | C_unshiu_00169 | 261779 | 263315 | Transcription factor | KmG-02 | 52.181 | JtR-02 | 25.334 | ||||||||
Mf0094 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_7 | 3721375 | 3722616 | ![]() | C_unshiu_00169 | 217948 | 219072 | Maternal effect embryo arrest protein | AGI-02 | 67.666 | KmG-02 | 52.124 | JtR-02 | 25.334 | ||||||
Lp0126 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_7 | 3946818 | 3949964 | ![]() | C_unshiu_00801 | 97228 | 100216 | Phototropic-responsive NPH3 family protein | AGI-02 | 65.295 | KmG-02 | 54.892 | JtR-02 | 26.278 | RP-02.2 | |||||
Ov0116 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3193875 | 3196468 | ![]() | C_unshiu_00342 | 154980 | 164222 | Hypothetical protein | KmG-02 | 53.208 | JtR-02 | 27.051 | RP-02.2 | 5.192 | |||||||
Al0621 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 4575503 | 4577125 | ![]() | C_unshiu_00656 | 32940 | 34329 | Hypothetical protein | AGI-02 | 60.566 | KmG-02 | 47.196 | JtR-02 | 28.472 | ||||||
Al0409 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | SI201,SI252 | ![]() ![]() | scaffold_7 | 5042508 | 5046271 | No | AGI-02 | 50.758 | KmG-02 | 44.930 | JtR-02 | 29.462 | NAT-02S | 90.742 | |||||||
Al0212 | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 5258045 | 5259521 | ![]() | C_unshiu_00288 | 142758 | 144183 | Mitochondrial uncoupling protein 3 | KmG-02 | 43.821 | JtR-02 | 30.507 | RP-08 | ||||||||
Vs0006 | ULess informative for main cultivars | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 19024295 | 19026021 | ![]() | C_unshiu_00468 | 132124 | 133922 | Cytochrome P450 78A4 | AGI-02 | 27.491 | JtR-02 | 50.216 | NAT-02S | 3.328 | ||||||
Ov0512 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 27198508 | 27199642 | ![]() | C_unshiu_00433 | 116730 | 118286 | Small heat shock protein | AGI-03 | 40.361 | KmG-032 | 25.743 | JtR-031 | NAT-03 | ||||||
Wy0012 | O | - | - | - | - | O | ![]() ![]() | scaffold_9 | 4888531 | 4892972 | ![]() | C_unshiu_00386 | 142436 | 145911 | Ethylene receptor | KmG-032 | 11.250 | JtR-031 | 4.898 | NAT-03 | 11.970 | |||||||
Al0413 | AAvailable marker | - | - | - | O | O | O | SI275,SI299 | ![]() ![]() | scaffold_9 | 7579900 | 7583093 | ![]() | C_unshiu_00063 | 483279 | 486427 | Chloroplast beta-amylase 3 | AGI-03 | 46.197 | KmG-032 | 19.570 | JtR-031 | 10.395 | RP-03 | 33.559 | |||
Ov0114 | - | - | - | - | - | - | ![]() | C_unshiu_00206 | 75980 | 77488 | Nucleoside diphosphate kinase | KmG-032 | 18.485 | JtR-031 | 11.761 | |||||||||||||
Ov0013 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 18058387 | 18060752 | ![]() | C_unshiu_00556 | 103101 | 105466 | Caffeic acid 3-O-methyltransferase | AGI-03 | 50.691 | KmG-032 | 18.852 | JtR-031 | 11.918 | RP-03 | 38.986 | ||||
Mf0095 | OOthers | O | - | - | - | - | - | SI290 | ![]() ![]() | scaffold_9 | 21216748 | 21221111 | ![]() | C_unshiu_00160 | 290257 | 294371 | Transmembrane proteins 14C, putative isoform 1 | KmG-032 | JtR-031 | 11.958 | RP-03 | 43.323 | ||||||
Gn0052 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 10357084 | 10359834 | ![]() | C_unshiu_00367 | 100255 | 102997 | Male sterility MS5 family protein | KmG-032 | 15.450 | JtR-031 | 12.830 | |||||||||
Wy0032 | OOthers | O | - | - | - | O | O | ![]() ![]() | scaffold_9 | 10357084 | 10359834 | ![]() | C_unshiu_00367 | 100255 | 102997 | Male sterility MS5 family protein | AGI-03 | 46.121 | KmG-032 | 14.572 | JtR-031 | 12.840 | ||||||
Mf0067 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 7264569 | 7269002 | ![]() | C_unshiu_00837 | 91807 | 96079 | Protein phosphatase 1 regulatory subunit pprA | KmG-032 | 18.460 | JtR-031 | 13.247 | ||||||||
Lp0041 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_9 | 6354796 | 6356630 | ![]() | C_unshiu_00146 | 205279 | 207014 | 50S ribosomal protein L28 | KmG-032 | 17.549 | JtR-031 | 14.643 | RP-03 | 29.608 | ||||||
Al0001 | - | - | - | - | - | - | ![]() | C_unshiu_00424 | 213541 | 217268 | Hypothetical protein | AGI-03 | 62.228 | JtR-031 | 17.616 | |||||||||||||
Ks9011 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_9 | 28984972 | 28989373 | ![]() | C_unshiu_00045 | 556440 | 562091 | Tubulin | JtR-032 | |||||||||||
Ov0109 | MDisagree by Marco analysis | O | - | - | - | - | - | SI172,SI202 | ![]() ![]() | scaffold_9 | 30513333 | 30517676 | ![]() | C_unshiu_00003 | 122283 | 126575 | Elongation factor 2 | AGI-03 | 71.060 | JtR-032 | 13.729 | RP-03 | 71.532 | |||||
Fb0708 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 31237089 | 31243737 | ![]() | C_unshiu_00003 | 803488 | 808730 | Zinc finger CCCH domain-containing protein 32 | AGI-03 | 74.195 | JtR-032 | 19.857 | |||||||||
Al0302 | AAvailable marker | - | O | - | - | O | O | SI090,SI311 | ![]() ![]() | scaffold_9 | 25073693 | 25080376 | ![]() | C_unshiu_00119 | 346131 | 352710 | Putative seed imbibition protein | AGI-03 | 48.375 | KmG-032 | 18.339 | JtR-033 | NAT-03 | 3.773 | RP-03 | 36.113 | ||
Gn0078 | MDisagree by Marco analysis | - | - | - | - | - | - | JtR-033 | ||||||||||||||||||||
Fb0827 | O | - | - | - | - | - | SI215,SI301 | ![]() ![]() | scaffold_9 | 2353442 | 2357780 | ![]() | C_unshiu_00394 | 41719 | 45690 | Chloroplast 1-deoxy-D-xylulose-5-phosphate synthase | AGI-03 | 19.017 | KmG-031 | 16.544 | JtR-034 | |||||||
Al0228 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 26206063 | 26208427 | ![]() | C_unshiu_00315 | 212819 | 220361 | Serine/threonine-protein kinase HT1 | JtR-034 | 7.115 | |||||||||||
Ov0502 | - | - | - | - | - | - | ![]() | C_unshiu_01254 | 64349 | 65139 | Hypothetical protein | KmG-04 | 62.093 | JtR-04 | 3.789 | RP-09 | ||||||||||||
Ov0510 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 10016564 | 10019369 | ![]() | C_unshiu_00279 | 116848 | 119657 | Phenylalanine ammonia-lyase 1 | KmG-04 | 62.284 | JtR-04 | 3.789 | ||||||||
Mf0084 | OOthers | - | - | - | - | - | - | SI383 | ![]() ![]() | scaffold_6 | 40381 | 43868 | ![]() | C_unshiu_01371 | 17746 | 21242 | ADP-ribosylation factor A1F | AGI-04 | 114.409 | KmG-04 | 66.806 | JtR-04 | 11.413 | |||||
Lp0145 | - | - | - | - | - | - | ![]() | C_unshiu_01491 | 47122 | 50568 | Class I glutamine amidotransferase superfamily protein | KmG-05S | 40.802 | JtR-05 | ||||||||||||||
Al0317 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 3006218 | 3008357 | ![]() | C_unshiu_00092 | 425854 | 427887 | CASP-like protein 4A2 | KmG-05S | 16.871 | JtR-05 | 9.525 | |||||||||
Mf0039 | AAvailable marker | O | - | - | - | O | O | SI016,SI147 | ![]() | C_unshiu_00343 | 221381 | 224081 | PLAC8 family protein | AGI-05 | 5.510 | KmG-05S | 5.643 | JtR-05 | 10.014 | |||||||||
Lp0009 | DDominant marker | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 30171791 | 30177202 | ![]() | C_unshiu_00134 | 71410 | 76705 | Phosphatase 2C 76 isoform 1 | KmG-05S | 36.573 | JtR-05 | 12.427 | ||||||||
If0219 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() | C_unshiu_00318 | 110550 | 117056 | Esterase | JtR-05 | 13.922 | NAT-05 | 28.283 | ||||||||||||
Al0326 | AAvailable marker | - | - | - | O | O | - | SI065,SI344 | ![]() ![]() | scaffold_3 | 6409311 | 6411254 | ![]() | C_unshiu_00443 | 62532 | 64193 | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 | AGI-05 | 42.609 | KmG-05S | 32.841 | JtR-05 | 16.025 | RP-05 | 27.235 | |||
Fb0369 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 7792188 | 7795727 | ![]() | C_unshiu_01545 | 37559 | 39424 | AT-rich interactive domain-containing protein 2 | AGI-05 | 44.172 | KmG-05S | 30.809 | JtR-05 | 16.246 | |||||||
Lp0143 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6076949 | 6080875 | ![]() | C_unshiu_00159 | 339926 | 343475 | Translation elongation factor G | AGI-05 | 45.297 | JtR-05 | 18.056 | ||||||||
Wy0018 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_3 | 5318874 | 5321054 | ![]() | C_unshiu_00442 | 123398 | 125451 | Homeobox-leucine zipper protein HAT3 | AGI-05 | 29.033 | KmG-05S | 20.128 | JtR-05 | 19.008 | ||||||
Gn0050 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 5382490 | 5385009 | ![]() | C_unshiu_00014 | 637698 | 638678 | CRT binding factor 3 | AGI-05 | 29.035 | KmG-05S | 21.884 | JtR-05 | 19.008 | |||||||
Wy0006 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 4903592 | 4905871 | ![]() | C_unshiu_00628 | 38419 | 40239 | Bax inhibitor 1 | KmG-05S | 19.072 | JtR-05 | 19.698 | NAT-05 | 21.803 | |||||||
Ov0301 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI078 | ![]() ![]() | scaffold_3 | 5360113 | 5362918 | ![]() | C_unshiu_00442 | 163615 | 166153 | Transcription factor | KmG-05S | 23.526 | JtR-05 | 19.932 | RP-05 | 21.590 | |||||
Al0320 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 541575 | 543121 | ![]() | C_unshiu_01206 | 4346 | 5819 | Phosphoenolpyruvate carboxylase family protein | JtR-05 | 23.890 | |||||||||||
Al0320.2 | Al0320.em | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_3 | 541575 | 543121 | ![]() | C_unshiu_01206 | 4346 | 5819 | Phosphoenolpyruvate carboxylase family protein | JtR-05 | 23.890 | |||||||||
Al0306 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI029 | ![]() ![]() | scaffold_3 | 7337405 | 7339222 | ![]() | C_unshiu_00199 | 77240 | 79028 | Expansin | JtR-05 | 23.944 | |||||||||
Al0217 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI350 | ![]() ![]() | scaffold_3 | 1203357 | 1206483 | No | KmG-05S | JtR-05 | 25.182 | ||||||||||||
Gn0041 | AAvailable marker | - | - | - | - | - | O | ![]() | C_unshiu_00123 | 116817 | 119061 | Homeobox-leucine zipper protein HAT5 | KmG-05S | 9.772 | JtR-05 | 28.396 | ||||||||||||
Lp0102 | MDisagree by Marco analysis | O | - | - | - | - | - | SI080,SI319,SI360,SI378 | ![]() ![]() | scaffold_3 | 30648732 | 30651259 | ![]() | C_unshiu_00759 | 917 | 3353 | Senescence-related gene 1 | AGI-05 | 42.737 | KmG-05S | 41.895 | JtR-05 | 28.682 | NAT-05 | 37.917 | RP-05 | 51.879 | |
Ov0316 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 3963024 | 3966516 | ![]() | C_unshiu_00318 | 155111 | 158235 | Zinc finger CCCH domain-containing protein 43 | JtR-05 | 31.749 | |||||||||||
Vt0011 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_3 | 12984411 | 12986574 | ![]() | C_unshiu_00337 | 2684 | 6536 | Subtilase family protein | AGI-05 | 41.306 | JtR-05 | 37.780 | ||||||||
Mf0041 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_3 | 45076821 | 45080633 | ![]() | C_unshiu_00069 | 123654 | 127483 | Histidine-containing phosphotransfer protein 1 | AGI-05 | 56.534 | KmG-05S | 73.977 | JtR-05 | 38.393 | ||||||
Mf0080 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44202968 | 44205663 | ![]() | C_unshiu_00217 | 286418 | 288656 | Transmembrane BAX inhibitor motif-containing protein 4 | AGI-05 | 55.049 | KmG-05S | 64.740 | JtR-05 | 38.503 | RP-04 | 37.046 | ||||
Al0309 | AAvailable marker | O | - | - | - | - | O | ![]() ![]() | scaffold_3 | 44900059 | 44900865 | ![]() | C_unshiu_00069 | 301188 | 317479 | Hypothetical protein | KmG-05S | 73.967 | JtR-05 | 38.749 | RP-05 | 86.332 | ||||||
Mf0055 | DDominant marker | - | - | - | - | O | O | ![]() ![]() | scaffold_3 | 45551345 | 45552620 | ![]() | C_unshiu_01674 | 17777 | 28549 | Hypothetical protein | AGI-05 | 57.948 | KmG-05S | 75.866 | JtR-05 | 38.749 | NAT-05 | 39.573 | ||||
Mf0073 | HDisagree on Clementine haploid genotype | - | - | - | - | - | - | ![]() | C_unshiu_00069 | 25589 | 28375 | Hypothetical protein | JtR-05 | 38.749 | NAT-05 | 44.567 | ||||||||||||
Mf0058 | T3 or more alleleic model | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 46818817 | 46822856 | ![]() | C_unshiu_00053 | 481338 | 485184 | Nitrogen regulatory protein P-II | AGI-08 | 57.196 | JtR-05 | 39.516 | ||||||||
Fb0364 | AAvailable marker | - | - | - | - | O | O | SI373 | ![]() ![]() | scaffold_3 | 13810497 | 13813004 | ![]() | C_unshiu_00542 | 15940 | 18433 | Nascent polypeptide-associated complex subunit alpha-like protein | AGI-05 | 41.306 | KmG-05S | 55.482 | JtR-05 | 39.609 | RP-05 | 56.834 | |||
Ov0420 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 24840386 | 24845254 | ![]() | C_unshiu_00286 | 176709 | 181573 | Methylenetetrahydrofolate reductase (NAD(P)H) | AGI-05 | 41.306 | JtR-05 | 41.208 | ||||||||
Ov0122 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 41636616 | 41641083 | ![]() | C_unshiu_01535 | 14018 | 19080 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase | KmG-05S | 65.738 | JtR-05 | 41.268 | ||||||||
Fb2159 | - | - | - | - | - | - | SI205,SI300 | ![]() ![]() | scaffold_3 | 39606431 | 39608387 | ![]() | C_unshiu_00037 | 551437 | 553057 | Pirin family protein | AGI-05 | 49.856 | KmG-05S | 68.781 | JtR-05 | 41.770 | SA-09 | |||||
Lp0135 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 39412819 | 39414334 | ![]() | C_unshiu_00457 | 27521 | 28982 | Xylem serinease 1-like protein | JtR-05 | 41.854 | |||||||||||
Al0319 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 43447942 | 43449920 | ![]() | C_unshiu_00411 | 140821 | 145311 | Actin-depolymerizing factor 2 | AGI-03 | 46.274 | KmG-05S | 65.273 | JtR-05 | 42.339 | RP-05 | 72.912 | ||||
If0203 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42229224 | 42231230 | ![]() | C_unshiu_00322 | 121122 | 123131 | Small ubiquitin-related modifier | AGI-05 | 51.293 | KmG-05S | 67.257 | JtR-05 | 43.446 | ||||||
Ov0127 | Ov0126.2 | - | - | - | - | - | - | SI124,SI284 | ![]() ![]() | scaffold_3 | 46814909 | 46817474 | ![]() | C_unshiu_00053 | 477728 | 479995 | ADP-ribosylation factor A1F | AGI-05 | 65.510 | KmG-05S | 81.631 | JtR-05 | 45.715 | RP-05 | 64.195 | |||
Ov0403 | AAvailable marker | O | - | - | - | O | O | SI136,SI298,SI325 | ![]() ![]() | scaffold_2 | 23891814 | 23893095 | ![]() | C_unshiu_00081 | 296655 | 297936 | Chlorophyll a/b binding protein | AGI-06 | 61.779 | KmG-06 | 12.610 | JtR-06S | ||||||
Mf0099 | OOthers | - | - | - | - | - | - | No | KmG-06 | 6.822 | JtR-06S | NAT-06S | ||||||||||||||||
Al0635 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_2 | 26435540 | 26438838 | ![]() | C_unshiu_00197 | 251131 | 253300 | GAGA-binding transcriptional activator | AGI-06 | 69.195 | KmG-06 | 15.268 | JtR-06S | 1.903 | NAT-06S | 7.869 | ||||
Al0224 | AAvailable marker | - | O | - | - | O | O | ![]() ![]() | scaffold_2 | 26630154 | 26632900 | ![]() | C_unshiu_00262 | 115955 | 118351 | Probable xyloglucan endotransglucosylase/hydrolase protein 27 | AGI-06 | 67.116 | KmG-06 | 17.100 | JtR-06S | 3.805 | NAT-06S | 8.025 | RP-06.1 | 28.576 | ||
Al0602 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_2 | 27141148 | 27141869 | ![]() | C_unshiu_00017 | 304994 | 305523 | Hypothetical protein | KmG-06 | 18.450 | JtR-06S | 3.805 | ||||||||
Mf0096 | OOthers | - | - | - | - | - | - | SI249,SI333 | ![]() ![]() | scaffold_2 | 27774863 | 27778271 | ![]() | C_unshiu_00745 | 48150 | 62370 | Hypothetical protein | AGI-06 | 60.007 | KmG-06 | 22.141 | JtR-06S | 5.708 | NAT-06S | 10.082 | |||
Ov0412 | OOthers | - | - | - | - | O | O | SI050,SI222 | ![]() ![]() | scaffold_2 | 31036088 | 31038222 | ![]() | C_unshiu_00143 | 67475 | 69537 | SEC14 cytosolic factor family protein | AGI-06 | 42.110 | KmG-06 | 39.373 | JtR-06S | 15.372 | |||||
Vs0005 | OOthers | O | - | - | - | - | - | SI022,SI075 | ![]() ![]() | scaffold_2 | 33216839 | 33219042 | ![]() | C_unshiu_00002 | 1511809 | 1513915 | Epoxide hydrolase 2 | AGI-06 | 31.521 | KmG-02 | 59.329 | JtR-06S | 50.000 | NAT-06S | 50.000 | |||
Al0633 | OOthers | O | - | - | - | - | O | SI123 | ![]() ![]() | scaffold_2 | 33837403 | 33842156 | ![]() | C_unshiu_00002 | 901824 | 911260 | Vascular plant one zinc finger protein isoform 1 | KmG-06 | 55.857 | JtR-06S | 59.645 | NAT-06S | 51.106 | RP-06.2 | 27.837 | |||
If0003 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI130 | ![]() ![]() | scaffold_2 | 35470078 | 35472862 | ![]() | C_unshiu_00048 | 64652 | 67377 | Aminomethyltransferase | AGI-06 | 18.136 | JtR-06S | 67.371 | |||||||
Al0408 | O | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23737757 | 23740513 | ![]() | C_unshiu_00001 | 727392 | 729266 | F-box/kelch-repeat protein SKIP11 | AGI-07 | 75.917 | KmG-07 | 13.235 | JtR-07 | 1.788 | |||||||
Gn0048 | AAvailable marker | - | O | - | - | O | O | SI289 | ![]() ![]() | scaffold_4 | 23695766 | 23697703 | ![]() | C_unshiu_00001 | 685451 | 687250 | Homeobox-leucine zipper protein HAT7 | AGI-07 | 74.225 | KmG-07 | 7.964 | JtR-07 | 4.200 | |||||
Ov0105.2 | Ov0106.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23552856 | 23556415 | ![]() | C_unshiu_00001 | 545345 | 548897 | Receptor-like kinase plant | AGI-07 | 74.064 | KmG-07 | 15.390 | JtR-07 | 5.947 | ||||||
Al0638 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 8662041 | 8665543 | ![]() | C_unshiu_00221 | 6658 | 10157 | VHS domain-containing protein | KmG-07 | 23.435 | JtR-07 | 17.224 | NAT-07 | 24.049 | ||||||
If0005 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 20629463 | 20633356 | ![]() | C_unshiu_00015 | 667011 | 671011 | Glucosamine/galactosamine-6-phosphate isomerase family protein | JtR-07 | 25.458 | NAT-07 | 15.764 | ||||||||
Mf0010 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI048,SI149 | ![]() ![]() | scaffold_4 | 19467669 | 19468803 | ![]() | C_unshiu_00099 | 12446 | 13357 | 30S ribosomal protein 3, chloroplastic | AGI-07 | 55.503 | KmG-07 | 42.271 | JtR-07 | 35.215 | NAT-07 | ||||
Vt0028 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 18947498 | 18950949 | ![]() | C_unshiu_00039 | 255025 | 269908 | Hypothetical protein | AGI-07 | 51.998 | KmG-07 | 44.183 | JtR-07 | 39.088 | |||||||
Ks9013 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 18947498 | 18950949 | ![]() | C_unshiu_00039 | 255025 | 269908 | Hypothetical protein | KmG-07 | 45.284 | JtR-07 | 39.119 | |||||||||
Mf0097 | AAvailable marker | O | O | - | O | O | O | SI235,SI365 | No | AGI-07 | 44.663 | KmG-07 | 50.959 | JtR-07 | 44.863 | NAT-07 | 3.290 | RP-07 | 46.168 | |||||||||
Ov0505 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_4 | 16626338 | 16629094 | ![]() | C_unshiu_00250 | 82573 | 84397 | Tyrosine decarboxylase | KmG-07 | 53.887 | JtR-07 | 48.672 | NAT-07 | 3.814 | ||||||
Gn0040 | AAvailable marker | - | - | - | - | O | O | SI015,SI337 | ![]() ![]() | scaffold_4 | 16232756 | 16233365 | ![]() | C_unshiu_00086 | 99963 | 109609 | AG MADS-box protein | AGI-07 | 43.542 | KmG-07 | 56.094 | JtR-07 | 48.672 | |||||
Al0331 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_4 | 8406632 | 8407188 | ![]() | C_unshiu_00111 | 83531 | 84087 | Hypothetical protein | KmG-09 | 9.593 | JtR-07 | 52.611 | RP-07 | 19.079 | ||||||
Mf0070 | MDisagree by Marco analysis | O | - | - | - | - | - | SI017 | ![]() ![]() | scaffold_2 | 3067337 | 3069249 | ![]() | C_unshiu_00246 | 68251 | 69988 | Hypothetical protein | AGI-07 | 36.616 | JtR-07 | 52.611 | RP-07 | 19.079 | |||||
Al0206 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_4 | 12309480 | 12311438 | ![]() | C_unshiu_00365 | 192643 | 194502 | NADPH-dependent codeinone reductase-like protein | AGI-07 | 38.565 | JtR-07 | 52.611 | RP-07 | 29.935 | ||||||
Mf0060 | - | - | - | - | - | - | ![]() | C_unshiu_00715 | 29601 | 30242 | Hypothetical protein | JtR-07 | 56.497 | |||||||||||||||
Al0416 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 22316999 | 22319482 | ![]() | C_unshiu_00639 | 90698 | 99467 | Elongation factor 1-alpha | AGI-08 | 23.023 | JtR-07 | 60.405 | NAT-082 | 21.126 | ||||||
Gn0002 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3335945 | 3338632 | ![]() | C_unshiu_00465 | 149021 | 153095 | Hypothetical protein | AGI-07 | 90.233 | JtR-07 | 64.361 | |||||||||
Fb0322 | O | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3249710 | 3254808 | ![]() | C_unshiu_00342 | 217525 | 222590 | Splicing factor 3B subunit 3 | AGI-07 | 14.580 | JtR-07 | 64.384 | RP-07 | 47.636 | |||||||
Vs0002 | MDisagree by Marco analysis | - | - | - | - | - | - | SI103,SI115 | ![]() ![]() | scaffold_5 | 41184180 | 41190033 | ![]() | C_unshiu_00127 | 341430 | 344325 | Hypothetical protein | AGI-09 | 36.685 | KmG-09 | 73.930 | JtR-07 | 68.221 | |||||
Ov0002 | AAvailable marker | O | - | - | - | O | O | SI110,SI179 | ![]() ![]() | scaffold_4 | 2422861 | 2424838 | ![]() | C_unshiu_00979 | 50508 | 52478 | 60S ribosomal protein L10 | AGI-07 | 13.657 | JtR-07 | 68.221 | RP-07 | 82.035 | |||||
Al0617 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_4 | 1021179 | 1023023 | ![]() | C_unshiu_00012 | 188654 | 191971 | Ubiquitin-binding WIYLD domain protein | AGI-07 | 8.553 | JtR-07 | 74.121 | ||||||||
Ov0508 | Ov0507.2 | - | - | - | - | - | - | SI322 | ![]() ![]() | scaffold_4 | 642157 | 644823 | ![]() | C_unshiu_00202 | 127322 | 129988 | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic | AGI-07 | 8.291 | JtR-07 | 76.060 | |||||||
Al0524 | AAvailable marker | O | O | - | - | O | O | SI043,SI341 | ![]() ![]() | scaffold_4 | 115362 | 118025 | ![]() | C_unshiu_02038 | 34256 | 38775 | Hypothetical protein | AGI-07 | 5.972 | JtR-07 | 76.060 | RP-07 | 74.381 | |||||
Vs0016 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() | C_unshiu_02110 | 27660 | 28723 | Metallothionein | AGI-05 | 25.980 | KmG-08 | 17.483 | JtR-08 | |||||||||||
Gn0042 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 25370176 | 25371445 | ![]() | C_unshiu_00498 | 140388 | 142383 | Deficiens | JtR-08 | 6.490 | |||||||||||
Al0515 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | SI178 | ![]() ![]() | scaffold_8 | 2673135 | 2674232 | ![]() | C_unshiu_00152 | 273851 | 275034 | DNA-damage-repair/toleration protein DRT100 | AGI-08 | 73.663 | JtR-08 | 14.154 | NAT-081 | 10.596 | |||||
Al0517 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_8 | 2572439 | 2574295 | ![]() | C_unshiu_00363 | 5892 | 7583 | Limonoid glucosyltransferase | AGI-08 | 74.016 | JtR-08 | 15.435 | ||||||||
Wy0039 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_8 | 18824262 | 18825514 | ![]() | C_unshiu_00459 | 34475 | 34918 | Hypothetical protein | AGI-08 | 45.276 | JtR-08 | 16.276 | ||||||||
Gn0049 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 1604460 | 1606311 | ![]() | C_unshiu_00024 | 699386 | 701126 | DUF1005 family protein | AGI-08 | 77.688 | JtR-08 | 17.757 | |||||||||
Lp0116 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 19397294 | 19398741 | ![]() | C_unshiu_02034 | 7573 | 8901 | DUF3049 family protein | JtR-08 | 18.207 | NAT-05 | 47.659 | ||||||||
Al0632 | HDisagree on Clementine haploid genotype | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 17809428 | 17813065 | ![]() | C_unshiu_00225 | 238952 | 242235 | Cellular nucleic acid-binding protein like | AGI-08 | 56.724 | JtR-08 | 18.952 | ||||||||
Ov0314 | AAvailable marker | O | - | - | - | O | O | SI107 | ![]() ![]() | scaffold_8 | 8176371 | 8177435 | ![]() | C_unshiu_00728 | 4070 | 4922 | Mannan polymerase complex subunit mnn9 | AGI-08 | 56.724 | KmG-08 | 58.356 | JtR-08 | 21.829 | RP-08 | 41.217 | |||
Gn0046 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 21522433 | 21525218 | ![]() | C_unshiu_00201 | 136005 | 138785 | Aspartic proteinase nepenthesin-1 | AGI-07 | 64.812 | JtR-08 | 23.181 | |||||||||
Fb0321 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 6834487 | 6837762 | ![]() | C_unshiu_00918 | 5010 | 7626 | Arginine decarboxylase 1 | AGI-08 | 56.405 | JtR-08 | 25.280 | ||||||||
Ov0520 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 4712393 | 4713689 | ![]() | C_unshiu_00438 | 34343 | 35619 | BURP domain-containing protein | AGI-08 | 33.144 | JtR-08 | 26.748 | ||||||||
Ov0006 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 5360113 | 5362918 | ![]() | C_unshiu_00442 | 163615 | 166153 | Transcription factor | KmG-05S | 25.587 | JtR-08 | 27.669 | ||||||||
Ov0104 | AAvailable marker | O | - | - | - | O | O | SI216 | ![]() ![]() | scaffold_9 | 13440332 | 13442904 | ![]() | C_unshiu_02379 | 22906 | 25482 | Obtusifoliol 14-alpha demethylase | AGI-08 | 56.724 | JtR-08 | 28.207 | |||||||
Ov0526 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 21522433 | 21525218 | ![]() | C_unshiu_00201 | 136005 | 138785 | Aspartic proteinase nepenthesin-1 | KmG-09 | JtR-09S | 0.758 | NAT-09 | ||||||||
Fb0110 | O | - | - | - | - | - | SI246 | ![]() ![]() | scaffold_5 | 8512380 | 8517835 | ![]() | C_unshiu_00033 | 37755 | 43368 | Bifunctional protein thiED | AGI-09 | 85.810 | KmG-09 | 23.401 | JtR-09S | 5.362 | ||||||
Bf0029 | MDisagree by Marco analysis | - | - | - | O | - | - | SI193,SI283 | ![]() | C_unshiu_00564 | 138967 | 142178 | Limonene synthase | AGI-09 | 84.912 | KmG-09 | 24.379 | JtR-09S | 5.526 | |||||||||
Al0204 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 275263 | 280936 | ![]() | C_unshiu_00003 | 1127884 | 1133567 | Myosin heavy chain-like protein | JtR-09S | 5.527 | |||||||||||
Ks9003 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_2 | 8436110 | 8440408 | ![]() | C_unshiu_00494 | 7014 | 11146 | Ascorbate oxidase | KmG-09 | 19.560 | JtR-09S | 5.836 | ||||||||
Ov0111 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_5 | 8532280 | 8539677 | ![]() | C_unshiu_00033 | 57678 | 65071 | TSA: Wollemia nobilis transcribed RNA sequence | AGI-09 | 85.810 | KmG-09 | 11.923 | JtR-09S | 6.157 | RP-09 | 20.238 | ||||
Al0419 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2452853 | 2455181 | ![]() | C_unshiu_00394 | 150531 | 152208 | Hypothetical protein | AGI-03 | 17.378 | KmG-09 | 9.593 | JtR-09S | 7.976 | ||||||
Fb0373 | O | - | - | - | - | - | ![]() ![]() | scaffold_5 | 6404463 | 6435349 | ![]() | C_unshiu_00034 | 150102 | 178260 | ATP-dependent RNA helicase DHX29 | AGI-09 | 85.810 | KmG-09 | 22.909 | JtR-09S | 7.995 | RP-09 | 0.104 | |||||
Al0207 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 4366802 | 4370111 | ![]() | C_unshiu_00186 | 178635 | 181547 | SNF1-related protein kinase regulatory subunit gamma-1 | AGI-09 | 84.537 | JtR-09S | 9.929 | ||||||||
Vs0015 | OOthers | - | - | - | - | - | - | ![]() | C_unshiu_00001 | 561308 | 564986 | Mitochondrial outer membrane protein porin of 34 kDa | AGI-09 | 115.452 | KmG-09 | 34.185 | JtR-09S | 15.823 | ||||||||||
Gn0019 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 26949951 | 26952841 | ![]() | C_unshiu_02041 | 18003 | 20672 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 | KmG-09 | 17.972 | JtR-09S | 22.316 | |||||||||
Ov0404 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_5 | 29768091 | 29769281 | ![]() | C_unshiu_00731 | 26598 | 28767 | Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | KmG-09 | 29.016 | JtR-09S | 31.495 | RP-09 | 29.347 | ||||||
Al0612 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 29481817 | 29485113 | ![]() | C_unshiu_01370 | 27014 | 30283 | UDP-glucuronic acid decarboxylase 1 | KmG-09 | 28.332 | JtR-09S | 32.873 | ||||||||
Ov0322 | ULess informative for main cultivars | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 36398988 | 36399239 | ![]() | C_unshiu_00241 | 39546 | 40639 | Microsomal signal peptidase 12 kDa protein | AGI-09 | 50.810 | KmG-09 | 42.179 | JtR-09S | 62.873 | RP-09 | 70.369 | ||||
Wy0030 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_5 | 36229310 | 36230518 | ![]() | C_unshiu_00619 | 87213 | 88404 | EXORDIUM like 2 | AGI-09 | 53.205 | KmG-09 | 44.154 | JtR-09S | 63.577 | NAT-09 | 65.585 | ||||
Ov0407 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_5 | 37043417 | 37051080 | ![]() | C_unshiu_00773 | 7888 | 15416 | OSBP(Oxysterol binding protein)-related protein 1C isoform 3 | AGI-09 | 46.097 | KmG-09 | 48.606 | JtR-09S | 66.176 | RP-09 | 76.027 | ||||
Ov0118 | AAvailable marker | O | - | - | - | O | O | SI357 | ![]() ![]() | scaffold_5 | 34294853 | 34297359 | ![]() | C_unshiu_03047 | 1418 | 3450 | Dihydrodipicolinate synthase | AGI-04 | 34.838 | KmG-09 | 36.138 | JtR-09S | 72.673 | NAT-09 | 55.867 | |||
Gn0021 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_5 | 39630111 | 39635609 | ![]() | C_unshiu_01033 | 47799 | 53166 | Somatic embryogenesis receptor kinase 1 | AGI-09 | 42.621 | KmG-09 | 68.220 | JtR-09S | 97.453 | NAT-09 | 83.381 | ||||
If0208 | AAvailable marker | - | O | - | O | O | O | SI083,SI317 | ![]() ![]() | scaffold_5 | 40628244 | 40630241 | ![]() | C_unshiu_00234 | 94988 | 99176 | TRNA-processing ribonuclease BN | AGI-09 | 39.296 | KmG-09 | 72.036 | JtR-09S | 115.150 | NAT-09 | 89.867 | |||
Af1255 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 28061221 | 28063450 | ||||||||||||||||||
Af1520 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 7360380 | 7367946 | ||||||||||||||||||
Al0215 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 21918726 | 21922966 | ![]() | C_unshiu_00595 | 85575 | 88636 | Disease resistance protein | AGI-01 | 38.255 | ||||||||||
Bf0180 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21112804 | 21117215 | ||||||||||||||||||
Cp1050 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 1537835 | 1540818 | ||||||||||||||||||
Fb0346 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 2002427 | 2008126 | ||||||||||||||||||
Lp0024 | HDisagree on Clementine haploid genotype | O | - | - | - | - | - | SI010,SI302 | ![]() ![]() | scaffold_7 | 1309884 | 1311067 | ![]() | C_unshiu_00218 | 98317 | 107740 | Heterogeneous nuclear ribonucleoprotein Q | AGI-02 | 74.555 | RP-02.2 | 17.330 | |||||||
Ov0129 | Ov0129.k | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 2717014 | 2719856 | |||||||||||||||||
Tf0166 | - | - | - | - | - | - | SI156 | ![]() ![]() | scaffold_5 | 19682579 | 19686163 | ![]() | C_unshiu_00050 | 140837 | 153470 | Hypothetical protein | AGI-09 | 101.351 | ||||||||||
Tf0442 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 23158292 | 23161424 | ||||||||||||||||||
Af0001 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 25190682 | 25192326 | ||||||||||||||||||
Af1256 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 940514 | 942972 | ||||||||||||||||||
Af1521 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 9799746 | 9804461 | ||||||||||||||||||
Al0216 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 7359982 | 7369305 | ||||||||||||||||||
Bf0182 | O | - | - | - | - | - | ![]() ![]() | scaffold_1 | 17831333 | 17834889 | ![]() | C_unshiu_00429 | 90883 | 94296 | 3-deoxy-D-manno-octulosonate cytidylyltransferase | AGI-01 | 47.439 | |||||||||||
Cp1056 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 20024370 | 20027538 | ||||||||||||||||||
Fb0357 | O | - | - | - | - | - | SI384 | ![]() ![]() | scaffold_5 | 40550222 | 40554434 | ![]() | C_unshiu_00889 | 44175 | 51825 | Hypothetical protein | AGI-09 | 39.104 | ||||||||||
Lp0025 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 25816949 | 25818472 | ||||||||||||||||||
Tf0167 | - | - | - | - | - | - | SI230,SI241,SI247 | ![]() ![]() | scaffold_4 | 17143350 | 17147918 | ![]() | C_unshiu_00478 | 19232 | 27824 | Sigma factor | AGI-07 | 46.244 | ||||||||||
Tf0443 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 5886744 | 5892919 | ||||||||||||||||||
Af0002 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 9468245 | 9468907 | ||||||||||||||||||
Af1257 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 25059045 | 25061910 | ||||||||||||||||||
Af1522 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 1507804 | 1510299 | ||||||||||||||||||
Bf0183 | O | - | - | - | - | - | SI308 | ![]() ![]() | scaffold_9 | 5254416 | 5256826 | ![]() | C_unshiu_01106 | 77275 | 79234 | Hypothetical protein | ||||||||||||
Cp1067 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 188504 | 192741 | ||||||||||||||||||
Lp0026 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3323209 | 3331825 | ||||||||||||||||||
Ov0302 | Ov0301.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 5360113 | 5362918 | ![]() | C_unshiu_00442 | 163615 | 166153 | Transcription factor | ||||||||||||
Tf0168 | AAvailable marker | O | O | - | O | O | O | SI175 | ![]() ![]() | scaffold_1 | 24898769 | 24905716 | ![]() | C_unshiu_00341 | 170777 | 178753 | AT-rich interactive domain-containing protein 4 | AGI-01 | 25.752 | |||||||||
Tf0444 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 10574673 | 10578797 | ||||||||||||||||||
Af0003 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 11373565 | 11374539 | ||||||||||||||||||
Af1258 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24591409 | 24594117 | ||||||||||||||||||
Af1523 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 6231492 | 6235447 | ||||||||||||||||||
Al0218.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 1203357 | 1206483 | ||||||||||||||||||
Bf0184 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 24893551 | 24898675 | ![]() | C_unshiu_00286 | 216376 | 220366 | Cysteine protease ATG4B | AGI-05 | 41.306 | |||||||||||
Cp1081 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 7826603 | 7829404 | ||||||||||||||||||
Lp0027 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 14967254 | 14971449 | ||||||||||||||||||
Ov0303 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 25160851 | 25164999 | ||||||||||||||||||
Tf0169 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2284484 | 2302268 | ||||||||||||||||||
Tf0445 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 6065092 | 6068908 | ||||||||||||||||||
Af0004 | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 8447414 | 8453714 | ![]() | C_unshiu_00290 | 83615 | 110154 | Hypothetical protein | AGI-02 | 2.847 | |||||||||||
Af1259 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 15528851 | 15538252 | ||||||||||||||||||
Af1524 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 9325319 | 9327565 | ||||||||||||||||||
Al0219 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 793820 | 798369 | ||||||||||||||||||
Bf0189 | - | - | - | - | - | - | ![]() | C_unshiu_00008 | 372226 | 374586 | Ferritin | RP-04 | 15.774 | |||||||||||||||
Cp1084 | OOthers | - | - | - | - | - | - | ![]() | C_unshiu_01090 | 23084 | 26817 | Sesquiterpene synthase | AGI-08 | 44.577 | ||||||||||||||
Lp0028 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 22362548 | 22366644 | ||||||||||||||||||
Ov0304 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 6482366 | 6484923 | ||||||||||||||||||
Tf0170 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 31237089 | 31243866 | ||||||||||||||||||
Tf0446 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42990251 | 42995979 | ||||||||||||||||||
Af0005 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2452853 | 2455181 | ||||||||||||||||||
Af1260 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 38869666 | 38875561 | ||||||||||||||||||
Af1525 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3636667 | 3641089 | ||||||||||||||||||
Al0220 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 3683537 | 3688814 | ||||||||||||||||||
Bf0193 | O | - | - | - | - | - | SI100,SI109 | ![]() ![]() | scaffold_2 | 35970577 | 35973973 | ![]() | C_unshiu_00077 | 102078 | 105358 | Scarecrow-like transcription factor PAT1 | RP-06.2 | 14.065 | ||||||||||
Cp1085 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2390010 | 2391658 | ![]() | C_unshiu_00025 | 337060 | 338142 | Putative geranylgeranyl pyrophosphate synthase 3-like | AGI-02 | 70.082 | |||||||||||
Fb0372 | - | - | - | - | - | - | SI343,SI052 | ![]() ![]() | scaffold_5 | 35123213 | 35124730 | ![]() | C_unshiu_00042 | 237022 | 238272 | Ubiquitin-fold modifier-conjugating enzyme 1 | AGI-09 | 59.896 | ||||||||||
Lp0029 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 329518 | 331024 | ||||||||||||||||||
Ov0305 | MDisagree by Marco analysis | O | - | - | - | - | - | SI028,SI292 | ![]() ![]() | scaffold_6 | 16909492 | 16912088 | ![]() | C_unshiu_00008 | 366943 | 369504 | 40S ribosomal protein S4 | AGI-08 | 88.433 | KmG-04 | 45.755 | RP-04 | 15.410 | |||||
Tf0171 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 25466629 | 25472365 | ||||||||||||||||||
Tf0447 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 2002427 | 2008126 | ||||||||||||||||||
Af0006 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 36883103 | 36887975 | ||||||||||||||||||
Af1261 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 20321003 | 20329872 | ||||||||||||||||||
Af1526 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 38852547 | 38855263 | ||||||||||||||||||
Al0221 | - | - | - | - | - | - | ||||||||||||||||||||||
Bf0195 | - | - | - | - | - | - | SI369 | ![]() ![]() | scaffold_5 | 31069237 | 31075092 | ![]() | C_unshiu_00422 | 35322 | 40511 | Sodium/hydrogen exchanger 2 | AGI-09 | 74.076 | ||||||||||
Cp1086 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2390010 | 2391658 | ||||||||||||||||||
Lp0030 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23185703 | 23187916 | ||||||||||||||||||
Tf0172 | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 9976621 | 9980176 | ![]() | C_unshiu_00496 | 48069 | 50951 | Auxin-induced protein IAA6 | AGI-02 | 10.638 | |||||||||||
Tf0448 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 252320 | 254049 | ||||||||||||||||||
Af0007 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 17014582 | 17026325 | ||||||||||||||||||
Af1262 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 28424576 | 28427136 | ||||||||||||||||||
Af1527 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 17175041 | 17177917 | ||||||||||||||||||
Al0222 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 30607996 | 30610863 | ||||||||||||||||||
Bf0197 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 5654376 | 5658039 | ||||||||||||||||||
Cp1093 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 16696979 | 16699623 | ||||||||||||||||||
Fb0374 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 6777322 | 6781162 | ||||||||||||||||||
Lp0031 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 22261408 | 22266208 | ![]() | C_unshiu_00639 | 45321 | 49901 | N-terminal isoform 1 | AGI-08 | 9.183 | |||||||||||
Ov0307 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 4937047 | 4940138 | |||||||||||||||||
Tf0173 | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 26097343 | 26099320 | ![]() | C_unshiu_00259 | 219790 | 227265 | Hypothetical protein | RP-06.1 | 28.110 | |||||||||||
Tf0449 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_1 | 28254307 | 28257305 | ![]() | C_unshiu_01997 | 32539 | 35330 | Translation initiation factor IF-3 | AGI-01 | 0.404 | ||||||||||
Af0008 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 32749064 | 32749699 | ||||||||||||||||||
Af1263 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 28494348 | 28496251 | ||||||||||||||||||
Af1528 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 1676368 | 1677018 | ||||||||||||||||||
Al0223 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 17438270 | 17440122 | ![]() | C_unshiu_00008 | 890026 | 891371 | CBL-interacting serine/threonine-protein kinase 11 | RP-04 | 17.965 | |||||||||||
Bf0200 | OOthers | - | - | - | - | - | - | SI335 | ![]() ![]() | scaffold_2 | 29022433 | 29030724 | ![]() | C_unshiu_00022 | 308324 | 316293 | Glutamine-tRNA ligase / glutaminyl-tRNA synthetas, putative isoform 1 | |||||||||||
Cp1111 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 8603450 | 8610239 | ![]() | C_unshiu_00290 | 241335 | 248051 | Cell division protein ftsH, putative isoform 1 | AGI-02 | 5.054 | ||||||||||
Fb0389 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 25179668 | 25188103 | ![]() | C_unshiu_00087 | 209767 | 218135 | Putative pesticidal crystal cry8Ba-like | AGI-08 | 56.850 | |||||||||||
Lp0032 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI286 | ![]() | C_unshiu_00679 | 124222 | 132199 | CwfJ-like family protein, putative isoform 1 | |||||||||||||||
Ov0308 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 16730150 | 16735004 | ||||||||||||||||||
Tf0175 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 5054551 | 5056146 | ||||||||||||||||||
Tf0450 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50399571 | 50401808 | ||||||||||||||||||
Af0009 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50406028 | 50412944 | ||||||||||||||||||
Af1264 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 18539347 | 18543298 | ||||||||||||||||||
Af1529 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 21228791 | 21231253 | ||||||||||||||||||
Bf0201 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 29370560 | 29376244 | ||||||||||||||||||
Cp1113 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 987368 | 992630 | ||||||||||||||||||
Fb0423 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 867235 | 871452 | ||||||||||||||||||
Lp0033 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 30923398 | 30926574 | ||||||||||||||||||
Ov0309 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 8078609 | 8083078 | ||||||||||||||||||
Tf0176 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 385469 | 388179 | ![]() | C_unshiu_00003 | 1226924 | 1232429 | Hypothetical protein | RP-01 | ||||||||||||
Tf0451 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 14694513 | 14700102 | ||||||||||||||||||
Af0010 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 40297492 | 40299711 | ||||||||||||||||||
Af1265 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 22789104 | 22792252 | ||||||||||||||||||
Af1530 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 20092033 | 20095946 | ||||||||||||||||||
Al0225 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 41093725 | 41097411 | ![]() | C_unshiu_01543 | 34106 | 35343 | DNA glycosylase superfamily protein | KmG-01 | 9.277 | |||||||||||
Bf0202 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 24103753 | 24107361 | ![]() | C_unshiu_00011 | 511309 | 514460 | Protein ETHYLENE INSENSITIVE 3 | RP-09 | 27.641 | |||||||||||
Cp1114 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 870926 | 875408 | ||||||||||||||||||
Fb0478 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 14592248 | 14596429 | ![]() | C_unshiu_00071 | 196512 | 200666 | Beta-glucosidase 44 | AGI-01 | 61.025 | |||||||||||
Lp0034 | ULess informative for main cultivars | O | - | - | - | - | - | ![]() | C_unshiu_00087 | 395005 | 398280 | Peroxisomal membrane protein 13 | ||||||||||||||||
Tf0177 | - | - | - | - | - | - | SI133 | ![]() ![]() | scaffold_1 | 385469 | 388179 | ![]() | C_unshiu_00003 | 1226924 | 1232429 | Hypothetical protein | ||||||||||||
Tf0452 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 31740431 | 31747095 | ||||||||||||||||||
Af0011 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 11357990 | 11362560 | ||||||||||||||||||
Af1266 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 8400378 | 8404853 | ||||||||||||||||||
Af1531 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 4984340 | 4987674 | ||||||||||||||||||
Al0226 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 2571941 | 2573984 | ||||||||||||||||||
Bf0203 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42410482 | 42413511 | ||||||||||||||||||
Cp1115 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 729077 | 730936 | ||||||||||||||||||
Lp0035 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 27259813 | 27263097 | ||||||||||||||||||
Ov0311 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 18341166 | 18342395 | ![]() | C_unshiu_00417 | 93426 | 94543 | Kunitz trypsin inhibitor | KmG-04 | 10.598 | NAT-09 | 82.730 | |||||||||
Tf0178 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 7232959 | 7238380 | ||||||||||||||||||
Tf0454 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_7 | 16108723 | 16113463 | ![]() | C_unshiu_00371 | 121418 | 127245 | GATA transcription factor | AGI-02 | 21.099 | ||||||||||
Af0012 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2458793 | 2459573 | ||||||||||||||||||
Af1267 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 1465301 | 1468225 | ||||||||||||||||||
Af1532 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 3988366 | 3989679 | ||||||||||||||||||
Al0227 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 42217935 | 42222257 | ||||||||||||||||||
Bf0204 | - | - | - | - | - | - | SI326 | ![]() ![]() | scaffold_7 | 3222483 | 3228894 | ![]() | C_unshiu_00084 | 139704 | 145312 | Zeaxanthin epoxidase, chloroplastic | RP-02.2 | 9.835 | ||||||||||
Cp1143 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() ![]() | scaffold_5 | 39858531 | 39862402 | ![]() | C_unshiu_00096 | 70713 | 73505 | Phosphoglycerate dehydrogenase | AGI-09 | 42.158 | ||||||||||
Fb0722 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 16098039 | 16100795 | ||||||||||||||||||
Lp0036 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 12998055 | 13001834 | ||||||||||||||||||
Ov0312 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 1344192 | 1349935 | ![]() | C_unshiu_00541 | 170170 | 175878 | Spastin | SA-09 | 8.022 | |||||||||||
Tf0181 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 14694513 | 14700102 | ||||||||||||||||||
Tf0455 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 9338651 | 9341271 | ![]() | C_unshiu_00067 | 74696 | 88429 | Hypothetical protein | AGI-06 | 114.172 | ||||||||||
Af0013 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 13416061 | 13417219 | ||||||||||||||||||
Af1268 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 22523213 | 22529556 | ||||||||||||||||||
Af1533 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 22118203 | 22120791 | ||||||||||||||||||
Bf0205 | O | - | - | - | - | - | SI236 | ![]() ![]() | scaffold_7 | 3541924 | 3543863 | ![]() | C_unshiu_00301 | 55570 | 57462 | WRKY | ||||||||||||
Cp1144 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 2649991 | 2655756 | ![]() | C_unshiu_00152 | 288550 | 294174 | Sodium:hydrogen antiporter 1 isoform 1 | AGI-08 | 70.995 | ||||||||||
Lp0037 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 18963487 | 18968140 | |||||||||||||||||
Ov0313 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 41844984 | 41847835 | ![]() | C_unshiu_00009 | 1013478 | 1016014 | Diphthine synthase | KmG-09 | 79.072 | ||||||||||
Tf0183 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 30873886 | 30877367 | ||||||||||||||||||
Tf0456 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44858333 | 44862278 | ||||||||||||||||||
Af0014 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 253879 | 254627 | ||||||||||||||||||
Af1269 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 27043124 | 27045483 | ||||||||||||||||||
Af1534 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 883603 | 885249 | ||||||||||||||||||
Al0229 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 49675354 | 49684423 | ||||||||||||||||||
Bf0207 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 22005783 | 22011411 | ||||||||||||||||||
Cp1162 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_5 | 35908181 | 35912917 | ![]() | C_unshiu_00255 | 260170 | 264872 | Phosphoribosylaminoimidazolesuccinocarboxamide synthase | AGI-09 | 53.232 | RP-09 | 69.673 | ||||||||
Lp0038 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 6686602 | 6688894 | ||||||||||||||||||
Tf0184 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_3 | 45393857 | 45398298 | ![]() | C_unshiu_00546 | 75023 | 78260 | Zinc finger CCCH domain-containing protein 3 | AGI-05 | 57.948 | ||||||||||
Vs0001 | - | - | - | - | - | - | ||||||||||||||||||||||
Af0015 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44021779 | 44027536 | ![]() | C_unshiu_00217 | 86393 | 91294 | Hypothetical protein | AGI-05 | 54.268 | |||||||||||
Af1270 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 17589895 | 17593051 | ||||||||||||||||||
Af1535 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 23814115 | 23817728 | ||||||||||||||||||
Al0230 | - | - | - | - | - | - | ||||||||||||||||||||||
Bf0212 | - | - | - | - | - | - | SI332 | ![]() ![]() | scaffold_2 | 9206686 | 9211152 | ![]() | C_unshiu_00004 | 401860 | 406444 | Carbonate dehydratase | AGI-06 | 117.593 | ||||||||||
Cp1163 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 16201971 | 16207283 | ||||||||||||||||||
Fb1121 | Fb1121.lg | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 22635764 | 22640239 | |||||||||||||||||
Lp0039 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 22309970 | 22314448 | ||||||||||||||||||
Ov0315 | ULess informative for main cultivars | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 23430375 | 23436161 | ![]() | C_unshiu_00098 | 207615 | 213748 | Putative nuclear matrix constituent protein 1-like protein | KmG-04 | 7.092 | ||||||||||
Tf0185 | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 31740431 | 31747095 | ||||||||||||||||||
Af0016 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 25074163 | 25075916 | ![]() | C_unshiu_00117 | 38949 | 40765 | Hypothetical protein | AGI-05 | 41.306 | |||||||||||
Af1271 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 13323583 | 13328683 | ||||||||||||||||||
Af1536 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6113049 | 6116055 | ||||||||||||||||||
Al0231 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 16223771 | 16226683 | ![]() | C_unshiu_00086 | 99963 | 109609 | Shatterproof | RP-06.1 | 7.272 | |||||||||||
Bf0213 | - | - | - | - | - | - | SI097 | ![]() ![]() | scaffold_5 | 37693882 | 37699178 | ![]() | C_unshiu_00238 | 14475 | 19398 | DnaJ domain protein | RP-09 | 77.126 | ||||||||||
Cp1177 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 4116356 | 4117315 | ||||||||||||||||||
Fb1134.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 9547707 | 9559498 | ![]() | C_unshiu_00140 | 164689 | 176715 | DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative isoform 5 | AGI-07 | 38.546 | |||||||||||
Tf0186 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 5382490 | 5385009 | ||||||||||||||||||
Vs0003 | AAvailable marker | - | - | - | - | O | O | SI077 | ![]() | C_unshiu_00009 | 675718 | 677501 | Cysteine proteinase RD19a | AGI-09 | 35.312 | KmG-09 | 72.447 | NAT-09 | 93.467 | |||||||||
Af0017 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 313112 | 317158 | ||||||||||||||||||
Af1272 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 24796351 | 24800588 | ||||||||||||||||||
Af1537 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 8417158 | 8419377 | ||||||||||||||||||
Al0232 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 4997089 | 4999255 | ||||||||||||||||||
Bf0215 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50793520 | 50795340 | ||||||||||||||||||
Cp1184 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 17809957 | 17817998 | ||||||||||||||||||
Fb1170 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 23829862 | 23832918 | ||||||||||||||||||
Ov0317 | Ov0316.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 3963024 | 3966516 | |||||||||||||||||
Tf0187 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 1950121 | 1950908 | ||||||||||||||||||
Vs0004 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 2078691 | 2083111 | ![]() | C_unshiu_00490 | 182148 | 190847 | Nucleosome assembly protein | KmG-06 | 51.244 | |||||||||||
Af0018 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 40691801 | 40694522 | ||||||||||||||||||
Af1273 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 12214029 | 12215007 | ||||||||||||||||||
Af1538 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 33921984 | 33926087 | ||||||||||||||||||
Al0234 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 1372972 | 1374927 | ![]() | C_unshiu_00369 | 74034 | 74546 | Ribosomal protein L19 | KmG-031 | 6.974 | NAT-03 | 47.094 | RP-03 | 3.219 | ||||||
Bf0216 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 15058920 | 15066775 | ||||||||||||||||||
Cp1196 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 19626061 | 19629792 | ||||||||||||||||||
Fb1227 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 3367718 | 3376062 | ![]() | C_unshiu_00051 | 463042 | 471084 | Chloride channel protein | AGI-03 | 19.631 | |||||||||||
Lp0042 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21342050 | 21345004 | ||||||||||||||||||
Ov0318 | ULess informative for main cultivars | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 19405285 | 19407278 | ![]() | C_unshiu_00273 | 103250 | 105183 | 40S ribosomal protein S5 | ||||||||||||
Tf0188 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 15774976 | 15777653 | ||||||||||||||||||
Af1003 | O | - | - | - | - | - | ![]() ![]() | scaffold_5 | 15605852 | 15610028 | ![]() | C_unshiu_00533 | 131430 | 141111 | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial | AGI-02 | 22.436 | |||||||||||
Af1274 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 3152548 | 3153983 | ||||||||||||||||||
Af1539 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 10097308 | 10100347 | ||||||||||||||||||
Al0235 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 25761570 | 25764926 | ||||||||||||||||||
Bf0218 | O | - | - | - | - | - | SI232 | ![]() ![]() | scaffold_5 | 36036990 | 36048487 | ![]() | C_unshiu_00406 | 134274 | 145322 | Isoamylase | AGI-09 | 53.205 | KmG-09 | 37.847 | RP-09 | 70.349 | ||||||
Cp1200 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() | C_unshiu_00810 | 99220 | 102123 | Myrcene synthase, chloroplastic | AGI-08 | 38.604 | ||||||||||||||
Fb1430 | Fb1430.lg | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 1879675 | 1880523 | ![]() | C_unshiu_00102 | 16507 | 17334 | 60S ribosome subunit biogenesis protein NIP7 homolog | AGI-03 | |||||||||||
Lp0043 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35334245 | 35336841 | |||||||||||||||||
Ov0319 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 25761570 | 25764926 | ![]() | C_unshiu_00066 | 333477 | 336681 | Ubiquitin system component Cue protein | KmG-032 | 19.158 | |||||||||||
Tf0189 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 21379384 | 21385293 | ||||||||||||||||||
Af1004 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24426760 | 24434342 | ||||||||||||||||||
Af1275 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 13035174 | 13037307 | ||||||||||||||||||
Af1540 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 477388 | 478920 | ||||||||||||||||||
Al0236 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 32806565 | 32812384 | ||||||||||||||||||
Bf0219 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24851462 | 24854925 | ||||||||||||||||||
Cp1201 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 19416844 | 19420948 | ||||||||||||||||||
Fb1505 | - | - | - | - | - | - | ||||||||||||||||||||||
Lp0044 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23618424 | 23622719 | ||||||||||||||||||
Ov0320 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 27640074 | 27641178 | ![]() | C_unshiu_00252 | 89281 | 90198 | 21 kDa protein | RP-03 | 56.919 | |||||||||||
Tf0191 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 5821401 | 5825173 | ||||||||||||||||||
Vs0007 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 1207141 | 1210820 | ||||||||||||||||||
Af1005 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 20715590 | 20719704 | ||||||||||||||||||
Af1276 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 7080222 | 7081373 | ||||||||||||||||||
Af1541 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 10510018 | 10517939 | ||||||||||||||||||
Al0237 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 5523075 | 5524475 | ||||||||||||||||||
Bf0221 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 24195180 | 24198282 | ![]() | C_unshiu_00132 | 211597 | 223530 | Hypothetical protein | AGI-03 | 47.887 | RP-03 | 37.193 | |||||||||
Cp1213 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 11598999 | 11601307 | ||||||||||||||||||
Fb1567 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50637673 | 50640392 | No | AGI-05 | 103.212 | |||||||||||||||
Lp0045 | - | - | - | - | - | - | ||||||||||||||||||||||
Ov0321 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42776479 | 42784038 | ||||||||||||||||||
Tf0193 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 27167271 | 27171073 | ||||||||||||||||||
Vs0008 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 947943 | 949892 | ||||||||||||||||||
Af1006 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 24661109 | 24664797 | ||||||||||||||||||
Af1277 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23811511 | 23814763 | ||||||||||||||||||
Af1542 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 10424779 | 10427904 | ||||||||||||||||||
Al0238 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 8494369 | 8496454 | ||||||||||||||||||
Bf0224 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 22244924 | 22252231 | ||||||||||||||||||
Cp1216 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_2 | 12112790 | 12113903 | ![]() | C_unshiu_00026 | 46658 | 47677 | CCR protein | AGI-06 | 76.905 | ||||||||||
Fb1611 | - | - | - | - | - | - | SI071 | ![]() ![]() | scaffold_2 | 27030188 | 27034752 | No | ||||||||||||||||
Lp0046 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 24274031 | 24276658 | ||||||||||||||||||
Tf0194 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42996886 | 43001548 | ||||||||||||||||||
Vs0009 | - | - | - | - | - | - | ||||||||||||||||||||||
Af1007 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 12814731 | 12817148 | ||||||||||||||||||
Af1278 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 6903804 | 6908960 | ||||||||||||||||||
Af1543 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42180650 | 42183843 | ||||||||||||||||||
Al0239 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 16185818 | 16187223 | ![]() | C_unshiu_00371 | 54653 | 56423 | B-box type zinc finger protein, putative | ||||||||||||
Bf0225 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 3460370 | 3462174 | ||||||||||||||||||
Cp1221 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 13627656 | 13629444 | ||||||||||||||||||
Fb1678 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6000266 | 6002833 | ![]() | C_unshiu_00997 | 44420 | 46811 | Putative axial regulator YABBY 2 | AGI-05 | 45.297 | |||||||||||
Lp0047 | - | - | - | - | - | - | ||||||||||||||||||||||
Ov0323 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 5549195 | 5553148 | ||||||||||||||||||
Tf0195 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 67997 | 74191 | ![]() | C_unshiu_01137 | 30837 | 36569 | AT-rich interactive domain-containing protein 3 | AGI-08 | 87.683 | ||||||||||
Vs0010 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 21035910 | 21038368 | ||||||||||||||||||
Af1008 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2470085 | 2471703 | ||||||||||||||||||
Af1279 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 14510787 | 14516311 | ||||||||||||||||||
Af1544 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2622969 | 2624754 | ||||||||||||||||||
Al0240 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_8 | 8033465 | 8038415 | ![]() | C_unshiu_00682 | 59786 | 63447 | Hypothetical protein | AGI-08 | 53.867 | ||||||||||
Bf0226 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() ![]() | scaffold_1 | 23654785 | 23658857 | ![]() | C_unshiu_00175 | 321759 | 325671 | SEC14 cytosolic factor | AGI-08 | 63.341 | ||||||||||
Cp1223 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50559205 | 50563745 | ||||||||||||||||||
Fb1685 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35693249 | 35696515 | ||||||||||||||||||
Lp0048 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 46374292 | 46377587 | ||||||||||||||||||
Ov0324 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_8 | 22575845 | 22578398 | ![]() | C_unshiu_01619 | 15139 | 24519 | Hypothetical protein | KmG-08 | 23.615 | ||||||||||
Tf0196 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 7796591 | 7799786 | ![]() | C_unshiu_01633 | 9442 | 11959 | Hypothetical protein | AGI-02 | 4.033 | |||||||||||
Vs0011 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 21035910 | 21038368 | ||||||||||||||||||
Af1009 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35818327 | 35822366 | ||||||||||||||||||
Af1281 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 20366637 | 20367616 | ||||||||||||||||||
Af1545 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 2153718 | 2155194 | ||||||||||||||||||
Al0241 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 17857849 | 17860063 | ||||||||||||||||||
Bf0229 | - | - | - | - | - | - | SI253 | ![]() ![]() | scaffold_9 | 17242218 | 17245901 | ![]() | C_unshiu_00122 | 118693 | 122329 | Selenium binding protein | AGI-03 | 46.274 | RP-03 | 37.885 | ||||||||
Cp1224 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 23891814 | 23893095 | ||||||||||||||||||
Fb1751 | - | - | - | - | - | - | SI264 | ![]() ![]() | scaffold_7 | 7977527 | 7984425 | ![]() | C_unshiu_00121 | 250743 | 257054 | Protein STRUBBELIG-RECEPTOR FAMILY 8 | ||||||||||||
Lp0049 | Lp0049.k | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50736750 | 50739959 | |||||||||||||||||
Ov0325 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35180594 | 35182774 | ![]() | C_unshiu_00048 | 359734 | 361893 | SGS domain-containing protein | NAT-082 | 48.374 | |||||||||||
Tf0197 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 14804828 | 14808139 | ||||||||||||||||||
Vs0012 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | |||||||||||||||||||||
Af1010 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 31656510 | 31666206 | ||||||||||||||||||
Af1282 | - | - | - | - | - | - | ||||||||||||||||||||||
Af1546 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 12406078 | 12408794 | ||||||||||||||||||
Al0242 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3437577 | 3441367 | ||||||||||||||||||
Bf0232 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 21861774 | 21865635 | ![]() | C_unshiu_01346 | 18206 | 22054 | T-complex protein 1 subunit delta | AGI-07 | 67.250 | RP-07 | 6.705 | |||||||||
Cp1225 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 17208075 | 17211871 | ||||||||||||||||||
Fb1784 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 445469 | 446936 | ![]() | C_unshiu_02466 | 2597 | 4055 | Class I chitinase | RP-05 | 52.311 | |||||||||||
Lp0101 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 15991108 | 15996585 | ||||||||||||||||||
Ov0326 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 21522433 | 21525218 | ||||||||||||||||||
Tf0198 | AAvailable marker | O | - | - | - | - | O | ![]() ![]() | scaffold_4 | 23695766 | 23697703 | ![]() | C_unshiu_00001 | 685451 | 687250 | Homeobox-leucine zipper protein HAT7 | ||||||||||||
Vs0013 | - | - | - | - | - | - | ||||||||||||||||||||||
Af1011 | O | - | - | - | - | - | ![]() ![]() | scaffold_6 | 25306829 | 25315243 | ![]() | C_unshiu_00009 | 289462 | 299397 | Hypothetical protein | RP-04 | 60.491 | |||||||||||
Af1283 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 29757723 | 29762309 | ||||||||||||||||||
Af1547 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 3864764 | 3867933 | ||||||||||||||||||
Al0243 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 20092033 | 20095946 | ||||||||||||||||||
Bf0233 | MDisagree by Marco analysis | O | - | - | - | - | - | SI359 | ![]() ![]() | scaffold_3 | 6502231 | 6504139 | ![]() | C_unshiu_00521 | 2449 | 4274 | Cytochrome P450 76C2 | AGI-05 | 42.581 | RP-05 | 27.235 | |||||||
Cp1252 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 30617746 | 30629437 | ||||||||||||||||||
Fb1916 | - | - | - | - | - | - | SI336 | ![]() ![]() | scaffold_2 | 12043969 | 12046230 | ![]() | C_unshiu_00026 | 110679 | 112686 | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 | RP-06.1 | 24.027 | ||||||||||
Ov0401 | MDisagree by Marco analysis | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 28736008 | 28740315 | No | KmG-08 | 58.635 | SA-06 | |||||||||||||
Tf0199 | - | - | - | - | - | - | SI023,SI157 | ![]() ![]() | scaffold_5 | 30994812 | 30999834 | ![]() | C_unshiu_00422 | 116754 | 121159 | Serine/threonine-protein kinase isoform 2 | ||||||||||||
Vs0014 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | ![]() | C_unshiu_00375 | 50515 | 51680 | Metallothionein | ||||||||||||||||
Af1012 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 16270394 | 16272027 | ||||||||||||||||||
Af1285 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 12807597 | 12808725 | ||||||||||||||||||
Af1548 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 25114213 | 25116604 | ||||||||||||||||||
Al0244 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 9849133 | 9852098 | ||||||||||||||||||
Bf0401 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 37906090 | 37910975 | ||||||||||||||||||
Cp1254 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21112804 | 21117215 | ||||||||||||||||||
Fb2130 | - | - | - | - | - | - | SI069,SI117 | ![]() ![]() | scaffold_8 | 24341129 | 24344795 | ![]() | C_unshiu_00021 | 452003 | 461315 | Hypothetical protein | AGI-08 | 11.809 | KmG-08 | 11.813 | ||||||||
Lp0103 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 16393309 | 16395378 | ![]() | C_unshiu_00332 | 142648 | 144673 | Pyridoxal biosynthesis lyase pdxS | RP-04 | 11.437 | ||||||||||
Ov0402 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 9847502 | 9854667 | ||||||||||||||||||
Tf0200 | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21095569 | 21102194 | ||||||||||||||||||
Af1013 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48621909 | 48624876 | ||||||||||||||||||
Af1286 | - | - | - | - | - | - | ||||||||||||||||||||||
Af1549 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2184513 | 2186967 | ||||||||||||||||||
Al0245 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 25185200 | 25188839 | ||||||||||||||||||
Bf0402 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 9137249 | 9144663 | ![]() | C_unshiu_00058 | 104866 | 110977 | TRNA-specific adenosine deaminase-like protein 3 | AGI-05 | 43.970 | |||||||||||
Cp1257 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 5582927 | 5587253 | ||||||||||||||||||
Fb2156 | Fb2156.lg | O | - | - | - | - | - | ![]() ![]() | scaffold_5 | 39992234 | 39996269 | ![]() | C_unshiu_00096 | 198494 | 202358 | Poly(A) binding protein 6, putative isoform 1 | AGI-09 | 41.254 | ||||||||||
Lp0104 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 27579627 | 27581411 | ||||||||||||||||||
Tf0201 | O | - | - | - | - | - | SI195 | ![]() ![]() | scaffold_7 | 15182950 | 15186486 | ![]() | C_unshiu_01526 | 17982 | 21291 | Ethylene-responsive transcription factor WRI1 | ||||||||||||
Af1014 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 43594638 | 43605172 | ||||||||||||||||||
Af1287 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 39601128 | 39604586 | ||||||||||||||||||
Af1551 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 6494973 | 6502196 | ||||||||||||||||||
Al0246 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44215333 | 44220917 | ||||||||||||||||||
Bf0403 | - | - | - | - | - | - | ||||||||||||||||||||||
Cp1267 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 7983788 | 7991526 | ![]() | C_unshiu_02325 | 1642 | 9359 | Riboflavin biosynthesis protein RibD | AGI-08 | 94.382 | ||||||||||
Lp0105 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | SI113,SI163,SI254 | ![]() ![]() | scaffold_7 | 815904 | 817239 | ![]() | C_unshiu_00353 | 92033 | 93437 | Hypothetical protein | AGI-02 | 75.939 | |||||||||
Tf0202 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3636667 | 3641089 | ||||||||||||||||||
Vs0017 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 6647158 | 6649599 | ||||||||||||||||||
Af1016 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2394471 | 2397293 | ||||||||||||||||||
Af1288 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35803512 | 35805985 | ||||||||||||||||||
Af1552 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 30527060 | 30531535 | ||||||||||||||||||
Al0247 | T3 or more alleleic model | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 2227827 | 2230752 | ![]() | C_unshiu_00024 | 104182 | 106823 | Somatic embryogenesis receptor kinase 1 | AGI-08 | 77.316 | KmG-08 | 91.101 | NAT-082 | 73.850 | ||||||
Bf0404 | - | - | - | - | - | - | ||||||||||||||||||||||
Cp1268 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 7327436 | 7329167 | ![]() | C_unshiu_00199 | 87134 | 88461 | Light-harvesting complex I protein subunit a4 | AGI-05 | 44.864 | |||||||||||
Gmom01 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 33273053 | 33276013 | ||||||||||||||||||
Lp0106 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 22868978 | 22880751 | ||||||||||||||||||
Ov0405 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 18406856 | 18412391 | ||||||||||||||||||
Tf0203 | - | - | - | - | - | - | SI121 | ![]() ![]() | scaffold_2 | 10459593 | 10472483 | ![]() | C_unshiu_00403 | 88988 | 102135 | Homeodomain transcriptional regulator | ||||||||||||
Vs0018 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 4612887 | 4617115 | ||||||||||||||||||
Af1017 | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 22671554 | 22672639 | No | AGI-03 | 46.274 | |||||||||||||||
Af1289 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 4289876 | 4293681 | ||||||||||||||||||
Af1553 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 45812589 | 45815067 | ||||||||||||||||||
Al0248 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 19779795 | 19784134 | ||||||||||||||||||
Bf0405 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2994525 | 3001770 | ||||||||||||||||||
Cp1278 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 12263755 | 12266130 | ||||||||||||||||||
Gmom02 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 4367068 | 4371625 | ||||||||||||||||||
Lp0107 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 21916592 | 21922770 | ||||||||||||||||||
Ov0406 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 5159995 | 5165972 | ||||||||||||||||||
Tf0204 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 23589702 | 23593390 | ||||||||||||||||||
Vt0001 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_2 | 35624935 | 35628855 | ![]() | C_unshiu_00337 | 2684 | 6536 | Subtilase family protein | AGI-06 | 16.327 | KmG-06 | 68.041 | ||||||||
Af1019 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 192512 | 196670 | ||||||||||||||||||
Af1290 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24413157 | 24415621 | ||||||||||||||||||
Af1554 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 23753759 | 23756754 | ![]() | C_unshiu_00080 | 491826 | 492778 | Protein CWC15 | AGI-01 | 28.775 | |||||||||||
Al0249 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 30490331 | 30496586 | ||||||||||||||||||
Bf0406 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 15773091 | 15776242 | ||||||||||||||||||
Cp1279 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_4 | 12900777 | 12903692 | ![]() | C_unshiu_00461 | 144878 | 147555 | Ornithine aminotransferase | AGI-07 | 40.184 | ||||||||||
Gmom03 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 1864604 | 1871328 | ![]() | C_unshiu_01325 | 7876 | 14474 | Bromo-adjacent-like (BAH) domain protein | AGI-05 | 7.888 | |||||||||||
Tf0205 | OOthers | O | - | - | - | - | - | SI274 | ![]() ![]() | scaffold_9 | 16383851 | 16393557 | ![]() | C_unshiu_00094 | 262934 | 272307 | UBX domain-containing protein 1 | AGI-03 | 46.274 | |||||||||
Vt0002 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 20868750 | 20872170 | ||||||||||||||||||
Af1021 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 40664635 | 40665640 | ||||||||||||||||||
Af1291 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 4779400 | 4780310 | ||||||||||||||||||
Af1555 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24502070 | 24504031 | ||||||||||||||||||
Al0250 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 24770754 | 24773948 | ||||||||||||||||||
Bf0407 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 10729034 | 10731466 | ||||||||||||||||||
Cp1283 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 34891100 | 34894176 | ||||||||||||||||||
Gmom04 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47476188 | 47479361 | ![]() | C_unshiu_00023 | 480170 | 486801 | Protein LHY | AGI-05 | 73.504 | |||||||||||
Lp0109 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 17561127 | 17562695 | |||||||||||||||||
Ov0408 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_6 | 18491789 | 18493623 | ![]() | C_unshiu_00248 | 247183 | 248778 | UDP-glycosyltransferase 71C4 | KmG-04 | 50.902 | RP-04 | 23.745 | ||||||||
Tf0206 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 23161294 | 23166939 | ||||||||||||||||||
Vt0003 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 8153660 | 8174407 | ![]() | C_unshiu_00616 | 10808 | 18470 | Hypothetical protein | AGI-08 | 56.724 | |||||||||||
Af1022 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 8486491 | 8488997 | ||||||||||||||||||
Af1292 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 6677314 | 6680214 | ||||||||||||||||||
Af1556 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 11107041 | 11109191 | ![]() | C_unshiu_01501 | 57291 | 59154 | Lactoylglutathione lyase/glyoxalase I family protein | AGI-02 | 11.728 | |||||||||||
Al0251 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6695171 | 6697430 | ||||||||||||||||||
Bf0408 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 4843157 | 4848614 | ||||||||||||||||||
Cp1292 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 2246732 | 2249558 | ||||||||||||||||||
Gmom05 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 33722934 | 33727855 | ||||||||||||||||||
Lp0110 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24271753 | 24272644 | ||||||||||||||||||
Ov0409 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 4736047 | 4740432 | ||||||||||||||||||
Tf0207 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 9008920 | 9021876 | ||||||||||||||||||
Vt0004 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 9805899 | 9809222 | ||||||||||||||||||
Af1023 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 2719654 | 2725331 | ||||||||||||||||||
Af1293 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 16597796 | 16602257 | ||||||||||||||||||
Af1558 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 29608462 | 29612474 | ||||||||||||||||||
Al0252 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24689989 | 24692884 | ||||||||||||||||||
Bf0409 | - | - | - | - | - | - | ![]() | C_unshiu_00616 | 72171 | 79153 | Disease resistance protein (CC-NBS-LRR class) family protein | AGI-08 | 57.386 | |||||||||||||||
Cp1302 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 7407834 | 7414015 | ||||||||||||||||||
Gmom06 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 2067586 | 2073007 | ||||||||||||||||||
Lp0111 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 36096009 | 36099799 | ||||||||||||||||||
Ov0410 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 41005054 | 41009065 | ||||||||||||||||||
Tf0208 | - | - | - | - | - | - | SI181 | ![]() ![]() | scaffold_6 | 23593516 | 23595492 | ![]() | C_unshiu_00098 | 370300 | 372260 | COL1 protein | ||||||||||||
Vt0005 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 36449346 | 36452178 | ||||||||||||||||||
Af1024 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35841859 | 35844177 | ||||||||||||||||||
Af1294 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 27774863 | 27778271 | ||||||||||||||||||
Af1559 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2211862 | 2215512 | ||||||||||||||||||
Al0256 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 19538138 | 19541255 | ||||||||||||||||||
Bf0410 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 32917826 | 32924241 | ||||||||||||||||||
Cp1308 | AAvailable marker | - | O | - | - | O | O | ![]() ![]() | scaffold_6 | 6329421 | 6335005 | ![]() | C_unshiu_00147 | 247701 | 253232 | Unspecific monooxygenase | AGI-04 | 101.201 | ||||||||||
Gmom07 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 7248627 | 7253007 | ||||||||||||||||||
Lp0112 | AAvailable marker | O | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3749809 | 3751724 | ![]() | C_unshiu_00236 | 161422 | 163318 | ATP synthase subunit d, mitochondrial | AGI-07 | 19.603 | RP-07 | 50.962 | ||||||||
Ov0411 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 23410636 | 23414246 | ||||||||||||||||||
Tf0209 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35642412 | 35646764 | ||||||||||||||||||
Vt0006 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24914885 | 24923422 | ||||||||||||||||||
Af1025 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48337105 | 48339028 | ||||||||||||||||||
Af1295 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3468083 | 3477274 | ||||||||||||||||||
Af1560 | - | - | - | - | - | - | ||||||||||||||||||||||
Al0257 | Al0257.k | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 22407412 | 22409529 | |||||||||||||||||
Bf0411 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21869065 | 21874083 | ![]() | C_unshiu_00500 | 128482 | 133656 | Sulfotransferase | ||||||||||||
Cp1323 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 17992563 | 17993671 | ||||||||||||||||||
Gmom08 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 4143948 | 4146608 | ||||||||||||||||||
Lp0113 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24480591 | 24484723 | ||||||||||||||||||
Tf0210 | - | - | - | - | - | - | SI183 | ![]() ![]() | scaffold_9 | 11993282 | 11999324 | ![]() | C_unshiu_00926 | 108384 | 111875 | Zinc finger protein NUTCRACKER | AGI-08 | 56.724 | ||||||||||
Vt0007 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 49821906 | 49825730 | ||||||||||||||||||
Af1026 | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 24690261 | 24692734 | ![]() | C_unshiu_00136 | 278221 | 280719 | Period circadian protein, putative isoform 1 | RP-06.1 | 24.027 | |||||||||||
Af1296 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 19133592 | 19137895 | ||||||||||||||||||
Af1561 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2420324 | 2423040 | ||||||||||||||||||
Al0301 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 45906879 | 45907641 | ||||||||||||||||||
Bf0412 | - | - | - | - | - | - | No | AGI-08 | 29.534 | |||||||||||||||||||
Cp1330 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 14898168 | 14903449 | ||||||||||||||||||
Gmom09 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 4143948 | 4146608 | ||||||||||||||||||
Lp0114 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 28623624 | 28626008 | ||||||||||||||||||
Ov0413 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 17809428 | 17813065 | ![]() | C_unshiu_00225 | 238952 | 242235 | Cellular nucleic acid-binding protein like | KmG-07 | 34.263 | |||||||||||
Tf0211 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 28607325 | 28610917 | ||||||||||||||||||
Vt0008 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 49256390 | 49259083 | ||||||||||||||||||
Af1027 | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2946301 | 2950297 | ||||||||||||||||||
Af1297 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 23311867 | 23313814 | ||||||||||||||||||
Af1562 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 548048 | 549062 | ||||||||||||||||||
Bf0413 | - | - | - | - | - | - | ![]() | C_unshiu_00293 | 231743 | 233897 | Hypothetical protein | AGI-09 | 86.996 | |||||||||||||||
Cp1334 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() | C_unshiu_01048 | 87386 | 90179 | Phosphoribosylformylglycinamidine cyclo-ligase | AGI-03 | 46.968 | ||||||||||||||
Gmom11 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 680835 | 684433 | ||||||||||||||||||
Lp0115 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 17809428 | 17813065 | ||||||||||||||||||
Ov0414 | Ov0413.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 17809428 | 17813065 | |||||||||||||||||
Tf0212 | - | - | - | - | - | - | SI196 | ![]() ![]() | scaffold_4 | 19816800 | 19825304 | ![]() | C_unshiu_00535 | 166525 | 174142 | Putative nuclear matrix constituent protein 1-like protein | AGI-07 | 56.586 | ||||||||||
Vt0009 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 24932481 | 24935909 | ![]() | C_unshiu_00135 | 25891 | 28913 | Major intrinsic protein (MIP) family transporter | AGI-04 | 38.770 | KmG-04 | 14.707 | |||||||||
Af1028 | O | - | - | - | - | - | ![]() ![]() | scaffold_5 | 42113621 | 42120391 | ||||||||||||||||||
Af1298 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2037273 | 2040825 | ||||||||||||||||||
Af1562b | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 1530713 | 1532413 | ||||||||||||||||||
Al0303 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24431064 | 24433341 | ||||||||||||||||||
Bf0414 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 7719550 | 7723396 | ||||||||||||||||||
Cp1336 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 3335945 | 3338632 | ||||||||||||||||||
Gmom12 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 25604509 | 25605857 | ||||||||||||||||||
Ov0415 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2339077 | 2341173 | ||||||||||||||||||
Tf0213 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_4 | 18839546 | 18848948 | ![]() | C_unshiu_00039 | 154778 | 176393 | Enhancer OF AG-4-like protein, putative | AGI-07 | 48.581 | ||||||||||
Vt0010 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48560245 | 48562027 | ||||||||||||||||||
Af1029 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 2110308 | 2113166 | ||||||||||||||||||
Af1299 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 27638163 | 27639131 | ||||||||||||||||||
Af1564 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 26206635 | 26210648 | ||||||||||||||||||
Al0304 | MDisagree by Marco analysis | - | - | - | - | - | - | SI259,SI293 | ![]() ![]() | scaffold_6 | 22616979 | 22619271 | ![]() | C_unshiu_00038 | 174815 | 175255 | Nutrient reservoir, putative | AGI-04 | 46.361 | KmG-04 | 16.744 | NAT-04 | RP-04 | 54.617 | ||||
Bf0415 | - | - | - | - | - | - | ![]() | C_unshiu_00643 | 115076 | 117637 | BEL1-like homeodomain protein 1 | AGI-08 | 46.736 | |||||||||||||||
Cp1340 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 125954 | 131376 | ||||||||||||||||||
Gmom13 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 13223034 | 13225922 | ![]() | C_unshiu_00620 | 118042 | 120892 | Ethylene-responsive transcription factor ERF114 | AGI-08 | 56.724 | |||||||||||
Lp0117 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 28815314 | 28816638 | ||||||||||||||||||
Ov0416 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 24807948 | 24823388 | ||||||||||||||||||
Tf0214 | - | - | - | - | - | - | SI020 | ![]() ![]() | scaffold_3 | 50133837 | 50139049 | ![]() | C_unshiu_00014 | 458017 | 462942 | Transcription factor UNE10 | ||||||||||||
Af1030 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 3930788 | 3932748 | ||||||||||||||||||
Af1300 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 8539647 | 8542949 | ||||||||||||||||||
Af1565 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 21875022 | 21879839 | ||||||||||||||||||
Al0305 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47200055 | 47201893 | ||||||||||||||||||
Bf0416 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 20762974 | 20770394 | ||||||||||||||||||
Cp1352 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 8198787 | 8204052 | ||||||||||||||||||
Gmom15 | - | - | - | - | - | - | ||||||||||||||||||||||
Ov0417 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 851900 | 857695 | ||||||||||||||||||
Tf0215 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 43036925 | 43044008 | ||||||||||||||||||
Vt0012 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 1806179 | 1809814 | ||||||||||||||||||
Af1031 | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 718488 | 722516 | ![]() | C_unshiu_00353 | 151145 | 154679 | 3-dehydroquinate synthase AroB | AGI-02 | 76.168 | |||||||||||
Af1301 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 866845 | 870030 | ||||||||||||||||||
Af1566 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 15346135 | 15348332 | ||||||||||||||||||
Bf0417 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 693215 | 695933 | ||||||||||||||||||
Cp1361 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_6 | 21714716 | 21717652 | ![]() | C_unshiu_01167 | 79036 | 81808 | 50S ribosomal 5 alpha, chloroplastic | AGI-04 | 52.740 | ||||||||||
Gmom16 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47476188 | 47479361 | ![]() | C_unshiu_00023 | 480170 | 486801 | Protein LHY | AGI-05 | 73.007 | |||||||||||
Lp0119 | AAvailable marker | - | - | - | - | O | O | SI276 | ![]() ![]() | scaffold_8 | 24315720 | 24317671 | ![]() | C_unshiu_00021 | 426040 | 431920 | Hypothetical protein | AGI-08 | 8.544 | |||||||||
Ov0418 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 11863906 | 11865549 | ||||||||||||||||||
Tf0216 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 29413143 | 29414562 | ||||||||||||||||||
Vt0013 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 13123280 | 13126173 | ||||||||||||||||||
Af1032 | O | - | - | - | - | - | ![]() ![]() | scaffold_1 | 8377489 | 8379348 | ||||||||||||||||||
Af1302 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 14457766 | 14462726 | ||||||||||||||||||
Af1567 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 22759341 | 22763218 | ||||||||||||||||||
Al0307 | Al0307.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 7337405 | 7339222 | |||||||||||||||||
Bf0418 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 38489257 | 38490776 | ||||||||||||||||||
Cp1362 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 21598429 | 21600967 | ||||||||||||||||||
Gmom17 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47476188 | 47479361 | ||||||||||||||||||
Lp0120 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50399571 | 50401808 | ||||||||||||||||||
Ov0419 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_6 | 16709179 | 16712039 | ![]() | C_unshiu_00008 | 178086 | 180944 | Pyruvate decarboxylase | RP-04 | 11.143 | ||||||||||
Tf0217 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 34910794 | 34916593 | ||||||||||||||||||
Vt0014 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21102979 | 21105476 | ||||||||||||||||||
Af1033 | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 10456899 | 10459385 | ||||||||||||||||||
Af1303 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 22810929 | 22812161 | ||||||||||||||||||
Af1568 | - | - | - | - | - | - | ![]() | C_unshiu_00591 | 108974 | 112318 | Putative elongation factor 2-like | AGI-01 | 24.954 | |||||||||||||||
Al0308 | - | - | - | - | - | - | SI045 | ![]() ![]() | scaffold_8 | 24521116 | 24524868 | ![]() | C_unshiu_00021 | 630527 | 634212 | NAD(P)H dehydrogenase B2 | AGI-05 | 56.788 | ||||||||||
Bf0419 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 8696694 | 8697639 | ||||||||||||||||||
Cp1366 | AAvailable marker | - | - | - | - | - | O | |||||||||||||||||||||
Gmom19 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 21450811 | 21454133 | ![]() | C_unshiu_00037 | 166873 | 170276 | Protein CCA1 | AGI-04 | 54.804 | |||||||||||
Lp0121 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 34829300 | 34831997 | ||||||||||||||||||
Tf0218 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 31489811 | 31497594 | ||||||||||||||||||
Af1034 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 1950121 | 1950908 | ||||||||||||||||||
Af1304 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 2210485 | 2215202 | ||||||||||||||||||
Af1569 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23192472 | 23198396 | ||||||||||||||||||
Bf1176 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 24312108 | 24313141 | ||||||||||||||||||
Cp1369 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 24737050 | 24741836 | ||||||||||||||||||
Gmom22 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 24041593 | 24043549 | ![]() | C_unshiu_00001 | 1037727 | 1039688 | NAC transcription factor NAM-B1 | AGI-07 | 78.469 | KmG-07 | 2.659 | |||||||||
Lp0122 | MDisagree by Marco analysis | O | - | - | - | - | - | SI170 | ![]() ![]() | scaffold_7 | 1309884 | 1311067 | ![]() | C_unshiu_00218 | 98317 | 107740 | Heterogeneous nuclear ribonucleoprotein Q | NAT-02S | 69.942 | RP-02.2 | 17.330 | |||||||
Ov0421 | Ov0420.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 24840386 | 24845254 | |||||||||||||||||
Tf0219 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | SI076,SI267 | ![]() ![]() | scaffold_9 | 25662049 | 25666791 | ![]() | C_unshiu_00115 | 248109 | 252610 | Transcription factor bHLH60 | AGI-03 | 49.250 | |||||||||
Vt0016 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 17974828 | 17979364 | ||||||||||||||||||
Af1035 | O | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23469184 | 23472872 | ||||||||||||||||||
Af1305 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 19760077 | 19761961 | ||||||||||||||||||
Af1570 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 4601588 | 4603705 | ||||||||||||||||||
Al0310 | Al0309.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44900059 | 44900865 | |||||||||||||||||
Bf1181 | - | - | - | - | - | - | ||||||||||||||||||||||
Cp1405 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 2002427 | 2008126 | ||||||||||||||||||
Gmom23 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 15182950 | 15186486 | ![]() | C_unshiu_01526 | 17982 | 21291 | Ethylene-responsive transcription factor WRI1 | KmG-02 | 20.942 | |||||||||||
Lp0123 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 32889614 | 32896199 | ||||||||||||||||||
Ov0422 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_2 | 11071587 | 11074479 | ![]() | C_unshiu_00184 | 295953 | 298736 | 14-3-3-like protein GF14 mu | RP-06.1 | 28.576 | ||||||||||
Tf0220 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 23657256 | 23657810 | ||||||||||||||||||
Vt0017 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 23705523 | 23709604 | ||||||||||||||||||
Af1036 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 7016831 | 7019863 | ![]() | C_unshiu_00425 | 65596 | 68473 | Replication factor C subunit 2 | AGI-05 | 43.118 | |||||||||||
Af1306 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 28968668 | 28973736 | ||||||||||||||||||
Af1571 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24533064 | 24536628 | ||||||||||||||||||
Al0311 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 5456336 | 5459361 | ||||||||||||||||||
Bf1182.2 | - | - | - | - | - | - | No | AGI-03 | 56.391 | |||||||||||||||||||
Cp1407 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 21243085 | 21244983 | ||||||||||||||||||
Gmom24 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 15182950 | 15186486 | ![]() | C_unshiu_01526 | 17982 | 21291 | Ethylene-responsive transcription factor WRI1 | AGI-02 | 19.971 | |||||||||||
Lp0124 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 10087523 | 10092758 | ||||||||||||||||||
Ov0423 | T3 or more alleleic model | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 42954362 | 42955051 | ![]() | C_unshiu_00152 | 189707 | 190632 | Hypothetical protein | AGI-05 | 55.522 | ||||||||||
Tf0221 | - | - | - | - | - | - | SI057,SI225 | ![]() ![]() | scaffold_7 | 490750 | 492882 | ![]() | C_unshiu_00488 | 44813 | 48259 | Ankyrin repeat domain-containing protein, chloroplastic | AGI-02 | 81.212 | ||||||||||
Vt0018 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 22471208 | 22474774 | ||||||||||||||||||
Af1037 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 1969590 | 1972842 | ![]() | C_unshiu_00058 | 521901 | 525000 | Uroporphyrinogen decarboxylase | AGI-04 | 50.972 | |||||||||||
Af1307 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 5310513 | 5314498 | ||||||||||||||||||
Af1572 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 22084232 | 22091205 | ||||||||||||||||||
Al0312 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 4144939 | 4148359 | ||||||||||||||||||
Bf1185 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 40993520 | 40993992 | No | AGI-09 | ||||||||||||||||
Cp1412 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47217428 | 47221472 | ||||||||||||||||||
Gmom26 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 713868 | 716708 | ![]() | C_unshiu_00007 | 473625 | 476336 | Prefoldin subunit 3 | AGI-03 | 10.918 | |||||||||||
Lp0125 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 11150758 | 11155385 | ||||||||||||||||||
Ov0424 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 23480483 | 23484398 | ||||||||||||||||||
Tf0222 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 28782169 | 28786731 | ||||||||||||||||||
Vt0019 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 41913536 | 41914321 | ||||||||||||||||||
Af1038 | - | - | - | - | - | - | ||||||||||||||||||||||
Af1308 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 13625504 | 13630800 | ||||||||||||||||||
Af1573 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 11163359 | 11165487 | ||||||||||||||||||
Al0313 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_6 | 23966039 | 23969583 | ![]() | C_unshiu_00133 | 22485 | 26003 | Putative phosphatidylinositol 4-kinase type 2-beta | AGI-04 | 38.152 | KmG-04 | 9.748 | ||||||||
Bf1186 | - | - | - | - | - | - | SI245 | ![]() ![]() | scaffold_6 | 21912438 | 21917736 | ![]() | C_unshiu_00079 | 278696 | 283911 | R3H domain-containing protein 2 | ||||||||||||
Cp1427 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_3 | 45576863 | 45579197 | ![]() | C_unshiu_00326 | 23073 | 25265 | Bifunctional protein FolD | AGI-05 | 58.917 | ||||||||||
Gmom27 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 16046322 | 16048971 | ||||||||||||||||||
Ov0425 | Bno homozygous cultivar with minor allele | - | - | - | - | - | - | SI051,SI291,SI351,SI371 | ![]() ![]() | scaffold_2 | 4021167 | 4024377 | ![]() | C_unshiu_00992 | 79008 | 82132 | DnaJ | AGI-07 | 41.317 | RP-07 | 25.534 | |||||||
Tf0223 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 23774309 | 23780334 | ||||||||||||||||||
Vt0020 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 1970129 | 1972842 | ||||||||||||||||||
Af1039 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 14381144 | 14384897 | ||||||||||||||||||
Af1309 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 50647753 | 50652010 | ||||||||||||||||||
Af1574 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 14444651 | 14447199 | ||||||||||||||||||
Al0314 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2574769 | 2577568 | ||||||||||||||||||
Bf1192 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 10678653 | 10684627 | ![]() | C_unshiu_00242 | 100038 | 105603 | Casein kinase I-like protein | AGI-01 | 57.863 | |||||||||||
Cp1428 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 49195569 | 49198341 | ||||||||||||||||||
Gmom28 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 12596113 | 12597155 | ||||||||||||||||||
Lp0127 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 21374019 | 21379609 | ||||||||||||||||||
Ov0426 | Ov0425.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 4021167 | 4024377 | |||||||||||||||||
Tf0224 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_6 | 7785328 | 7796808 | ![]() | C_unshiu_00104 | 400959 | 412354 | Zinc finger CCCH domain-containing protein 32 | AGI-04 | 99.859 | ||||||||||
Vt0021 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2015894 | 2023323 | ||||||||||||||||||
Af1040 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 29351854 | 29354190 | ||||||||||||||||||
Af1310 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 14481402 | 14484929 | ||||||||||||||||||
Af1575 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 17524835 | 17526697 | ![]() | C_unshiu_02252 | 7997 | 9032 | Photosystem II reaction center W protein | AGI-08 | 56.724 | |||||||||||
Al0315 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 4905341 | 4909930 | ||||||||||||||||||
Bf1198 | - | - | - | - | - | - | ||||||||||||||||||||||
Cp1436 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48720837 | 48722931 | ||||||||||||||||||
Gmom29 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 12677414 | 12680761 | ![]() | C_unshiu_00578 | 77446 | 80730 | Putative WRKY transcription factor 33 | AGI-02 | 22.436 | |||||||||||
Lp0128 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 2848884 | 2853210 | ||||||||||||||||||
Ov0427 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2156679 | 2158871 | ![]() | C_unshiu_00553 | 110847 | 134434 | Hypothetical protein | KmG-05S | 36.268 | |||||||||||
Tf0225 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 36211961 | 36216858 | ||||||||||||||||||
Vt0022 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 24201196 | 24203794 | ||||||||||||||||||
Af1041 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 40300306 | 40304768 | ||||||||||||||||||
Af1311 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2025698 | 2028188 | ||||||||||||||||||
Af1576 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 41566338 | 41572373 | No | AGI-05 | 47.986 | |||||||||||||||
Al0316 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 40918148 | 40922656 | ||||||||||||||||||
Bf1204 | - | - | - | - | - | - | SI364 | ![]() ![]() | scaffold_6 | 13750671 | 13752605 | ![]() | C_unshiu_00155 | 17608 | 19347 | Hypothetical protein | ||||||||||||
Cp1439 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47139756 | 47144124 | ||||||||||||||||||
Gmom31 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 27783419 | 27789937 | ||||||||||||||||||
Lp0129 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 25349417 | 25351949 | ||||||||||||||||||
Ov0428 | Ov0427.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2156679 | 2158871 | |||||||||||||||||
Tf0226 | AAvailable marker | O | - | - | - | - | O | ![]() ![]() | scaffold_1 | 526813 | 529150 | ![]() | C_unshiu_00129 | 303106 | 311407 | Exocyst subunit EXO70 family protein | RP-01 | 1.100 | ||||||||||
Vt0023 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 8712236 | 8714558 | ||||||||||||||||||
Af1042 | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 28786444 | 28788097 | No | AGI-06 | 55.700 | |||||||||||||||
Af1312 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 29022433 | 29030537 | ![]() | C_unshiu_00022 | 308324 | 316293 | Glutamine-tRNA ligase / glutaminyl-tRNA synthetas, putative isoform 1 | AGI-06 | 37.883 | |||||||||||
Af1577 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6602994 | 6605239 | ||||||||||||||||||
Bf1207 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 22912695 | 22913798 | ![]() | C_unshiu_00103 | 319187 | 320041 | Hypothetical protein | AGI-01 | ||||||||||||
Cp1441 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 37735873 | 37744747 | ||||||||||||||||||
Gn0001 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 12840408 | 12842940 | ||||||||||||||||||
Lp0130 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 11512415 | 11514434 | ||||||||||||||||||
Ov0429 | Ov0429.k | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 290799 | 294122 | |||||||||||||||||
Tf0227 | AAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_4 | 21666061 | 21671693 | ![]() | C_unshiu_00010 | 183508 | 188843 | Trihelix transcription factor GT-1 | AGI-08 | 35.927 | ||||||||||
Vt0024 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 21593473 | 21597037 | ||||||||||||||||||
Af1043 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 20049936 | 20052008 | ![]() | C_unshiu_00519 | 110187 | 111261 | Ribonucleoside-diphosphate reductase subunit M2 | AGI-02 | 44.231 | |||||||||||
Af1313 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 31222299 | 31225439 | ||||||||||||||||||
Af1578 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48016069 | 48017656 | ||||||||||||||||||
Al0318 | Al0318.2 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_3 | 3006218 | 3008357 | ||||||||||||||||
Bf1208 | - | - | - | - | - | - | SI108 | No | ||||||||||||||||||||
Cp1474 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 37517043 | 37521275 | ||||||||||||||||||
Lp0131 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 20390517 | 20391131 | ||||||||||||||||||
Ov0501 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48089473 | 48091232 | ![]() | C_unshiu_00026 | 712172 | 713868 | Nepenthesin II | RP-05 | 61.026 | |||||||||||
Tf0228 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 6025802 | 6031497 | ||||||||||||||||||
Vt0025 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 6764664 | 6770188 | ||||||||||||||||||
Af1044 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 16378858 | 16383103 | ||||||||||||||||||
Af1314 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 38283419 | 38284959 | ||||||||||||||||||
Af1579 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 75348 | 78181 | ||||||||||||||||||
Bf1243 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 24657015 | 24660141 | ![]() | C_unshiu_00001 | 1663630 | 1666687 | U3 small nucleolar ribonucleoprotein IMP4 | AGI-07 | 84.114 | |||||||||||
Cp1477 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 36095844 | 36099890 | ![]() | C_unshiu_01173 | 62977 | 66775 | Thylakoid lumenal 29 kDa protein, chloroplastic | AGI-09 | 54.123 | |||||||||||
Gn0003 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 1207141 | 1210820 | ||||||||||||||||||
Lp0132 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 5469050 | 5475142 | ||||||||||||||||||
Tf0229 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 24248767 | 24251495 | ||||||||||||||||||
Vt0026 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44691395 | 44694360 | ||||||||||||||||||
Af1045 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 9197774 | 9204364 | ||||||||||||||||||
Af1315 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 203839 | 207450 | ||||||||||||||||||
Af1580 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35013848 | 35015439 | ![]() | C_unshiu_00048 | 512885 | 514767 | NAD(P)-binding Rossmann-fold superfamily protein isoform 2 | AGI-06 | 20.932 | |||||||||||
Bf1253 | - | - | - | - | - | - | ||||||||||||||||||||||
Cp1483 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 20762974 | 20770394 | ![]() | C_unshiu_00692 | 122321 | 129331 | Abhydrolase domain-containing protein 11 | AGI-05 | 41.162 | |||||||||||
Lp0133 | AtAvailable marker | O | - | - | - | O | O | ![]() ![]() | scaffold_3 | 39657613 | 39660222 | ![]() | C_unshiu_00037 | 603033 | 605555 | Class I chitinase | AGI-05 | 48.590 | KmG-05S | 60.040 | NAT-05 | 26.483 | RP-05 | 65.128 | ||||
Ov0503 | AtAvailable marker | O | - | - | - | - | O | ![]() ![]() | scaffold_3 | 28382218 | 28386683 | ![]() | C_unshiu_00585 | 31636 | 34824 | 60S ribosomal protein L5 | NAT-05 | 19.042 | ||||||||||
Tf0230 | - | - | - | - | - | - | SI140 | ![]() ![]() | scaffold_1 | 23463843 | 23470911 | ![]() | C_unshiu_00338 | 163174 | 169978 | NAD-dependent protein deacetylase SRT1 | ||||||||||||
Vt0027 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 303399 | 306794 | ||||||||||||||||||
Af1046 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 39992234 | 39996269 | ||||||||||||||||||
Af1316 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 685220 | 687072 | ||||||||||||||||||
Af1581 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 27092414 | 27093612 | ||||||||||||||||||
Cp0001 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47576415 | 47578036 | ||||||||||||||||||
Cp1487 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 541575 | 543121 | ||||||||||||||||||
Gn0005 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35693249 | 35696515 | ![]() | C_unshiu_00337 | 68883 | 71725 | Fibrillin | AGI-06 | 16.857 | KmG-06 | 63.840 | NAT-06S | 59.976 | ||||||
Lp0134 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24480591 | 24484723 | ||||||||||||||||||
Ov0504 | Ov0503.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 28382218 | 28386683 | |||||||||||||||||
Tf0231 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 6760311 | 6763833 | ||||||||||||||||||
Af1047 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 16357227 | 16363309 | ![]() | C_unshiu_01252 | 60669 | 66705 | NADH dehydrogenase subunit 11 | AGI-05 | 41.306 | |||||||||||
Af1317 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 35932198 | 35935023 | ||||||||||||||||||
Af1583 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 29549722 | 29551403 | ||||||||||||||||||
Al0321.2 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 541575 | 543121 | |||||||||||||||||
Cp0002 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 47583337 | 47586652 | ||||||||||||||||||
Cp1488 | Cp1488.1 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6602994 | 6605239 | |||||||||||||||||
Gn0005.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 35693249 | 35696515 | ||||||||||||||||||
Tf0232 | - | - | - | - | - | - | SI258,SI261 | ![]() ![]() | scaffold_5 | 37066208 | 37070717 | ![]() | C_unshiu_00773 | 31351 | 35269 | Histone-lysine N-methyltransferase ASHR1 | ||||||||||||
Vt0029 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 2451345 | 2454325 | ![]() | C_unshiu_00979 | 79016 | 81937 | GroES-like zinc-binding alcohol dehydrogenase family protein | AGI-07 | 13.238 | |||||||||||
Af1048 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 16357227 | 16363309 | ||||||||||||||||||
Af1318 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 12549543 | 12550712 | ||||||||||||||||||
Af1584 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 17424218 | 17426071 | ||||||||||||||||||
Al0322 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 34801352 | 34804440 | ||||||||||||||||||
Cp0003 | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 11826472 | 11830875 | ||||||||||||||||||
Cp1488.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6602994 | 6605239 | ||||||||||||||||||
Gn0006 | - | - | - | - | - | - | ||||||||||||||||||||||
Lp0136 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 10500879 | 10504450 | ||||||||||||||||||
Ov0506 | Ov0505.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 16626338 | 16629094 | |||||||||||||||||
Tf0233 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 6772264 | 6775904 | ||||||||||||||||||
Vt0030 | Vt0030.k | O | - | - | - | - | - | ![]() ![]() | scaffold_7 | 11271705 | 11277014 | ![]() | C_unshiu_01240 | 27655 | 32960 | Phospholipase D | AGI-02 | 12.615 | ||||||||||
Af1050 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 42879563 | 42882316 | ||||||||||||||||||
Af1320 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 34602479 | 34604518 | ||||||||||||||||||
Af1585 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 3462353 | 3463444 | ||||||||||||||||||
Al0323 | OOthers | - | - | - | - | - | - | ![]() ![]() | scaffold_6 | 18188139 | 18189060 | |||||||||||||||||
Cp0004 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 48753307 | 48755805 | ||||||||||||||||||
Cp1489 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6577360 | 6582553 | ||||||||||||||||||
Gn0007.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 17778571 | 17785482 | ||||||||||||||||||
Lp0137 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 39657613 | 39660222 | ||||||||||||||||||
Ov0507 | AAvailable marker | - | - | - | - | - | O | ![]() ![]() | scaffold_4 | 642157 | 644823 | |||||||||||||||||
Tf0234 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 23476661 | 23480861 | ||||||||||||||||||
Vt0031 | - | - | - | - | - | - | ||||||||||||||||||||||
Af1051 | O | - | - | - | - | - | ![]() ![]() | scaffold_5 | 35093132 | 35106001 | ||||||||||||||||||
Af1321 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 16371168 | 16375666 | ![]() | C_unshiu_00108 | 320409 | 344557 | Hypothetical protein | AGI-06 | 34.500 | |||||||||||
Af1586 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 23119502 | 23122347 | ![]() | C_unshiu_00148 | 145165 | 147922 | Glycoprotein family protein | AGI-03 | 63.545 | |||||||||||
Al0324 | MDisagree by Marco analysis | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 20424287 | 20425903 | ![]() | C_unshiu_00320 | 12758 | 14314 | Hypothetical protein | AGI-08 | 41.127 | NAT-082 | 31.019 | RP-08 | 17.081 | ||||||
Cp0006 | O | - | - | - | - | - | ![]() ![]() | scaffold_4 | 14610897 | 14614381 | ||||||||||||||||||
Cp1490 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6369398 | 6372018 | ||||||||||||||||||
Gn0008 | OOthers | - | - | - | - | - | - | SI176 | ![]() ![]() | scaffold_9 | 17789634 | 17793258 | ![]() | C_unshiu_00098 | 5120 | 17442 | Phytoene desaturase | AGI-03 | 46.274 | |||||||||
Lp0138 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 2599957 | 2603377 | ||||||||||||||||||
Tf0235 | MDisagree by Marco analysis | O | - | - | O | - | - | ![]() ![]() | scaffold_4 | 17057658 | 17074755 | ![]() | C_unshiu_00225 | 75706 | 96678 | TATA-binding protein-associated factor 172 | AGI-07 | 43.879 | ||||||||||
Vt0032 | O | - | - | - | - | - | SI024 | ![]() ![]() | scaffold_7 | 17901487 | 17905433 | ![]() | C_unshiu_00382 | 163577 | 167662 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | AGI-02 | 25.601 | RP-02 | 6.081 | ||||||||
Af1052 | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 12808154 | 12820311 | ![]() | C_unshiu_00508 | 40385 | 58179 | Hypothetical protein | AGI-08 | 56.724 | |||||||||||
Af1322 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 41715562 | 41717774 | ||||||||||||||||||
Af1587 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 39483387 | 39486219 | ||||||||||||||||||
Al0325 | - | - | - | - | - | - | ||||||||||||||||||||||
Cp0007 | ULess informative for main cultivars | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 46924692 | 46927004 | |||||||||||||||||
Cp1500 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 7080249 | 7086989 | ![]() | C_unshiu_00161 | 150519 | 157206 | 3-isopropylmalate dehydratase large subunit | AGI-03 | 46.274 | |||||||||||
Gn0009 | AAvailable marker | - | - | - | - | O | O | AGI-04 | 57.369 | KmG-04 | 27.843 | |||||||||||||||||
Lp0139 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 1470163 | 1473304 | ||||||||||||||||||
Ov0509 | ULess informative for main cultivars | O | - | - | - | - | - | No | AGI-09 | 102.280 | RP-09 | 21.445 | ||||||||||||||||
Tf0236 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 38595158 | 38602400 | ||||||||||||||||||
Vt0033 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 23695881 | 23697100 | ||||||||||||||||||
Af1053 | O | - | - | - | - | - | ![]() ![]() | scaffold_2 | 29206818 | 29208977 | ||||||||||||||||||
Af1324 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 38189669 | 38190638 | ||||||||||||||||||
Af1588 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 6750503 | 6754741 | ||||||||||||||||||
Cp0009 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 46143241 | 46147293 | ||||||||||||||||||
Cp1501 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 24336809 | 24337802 | ||||||||||||||||||
Gn0010 | - | - | - | - | - | - | ||||||||||||||||||||||
Tf0237 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 29392885 | 29395387 | ||||||||||||||||||
Vt0034 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 39630111 | 39635609 | ||||||||||||||||||
Af1054 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 2033331 | 2036879 | ||||||||||||||||||
Af1325 | - | - | - | - | - | - | ![]() ![]() | scaffold_7 | 6287460 | 6289468 | ||||||||||||||||||
Af1589 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 30995129 | 30999295 | ![]() | C_unshiu_00003 | 574672 | 576940 | Peroxisomal 2,4-dienoyl-CoA reductase | AGI-03 | 77.744 | |||||||||||
Al0327 | Al0326.2 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 6409311 | 6411254 | |||||||||||||||||
Cp0010 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 45604806 | 45609651 | ||||||||||||||||||
Cp1523 | AAvailable marker | - | - | - | - | O | O | ![]() ![]() | scaffold_9 | 1356758 | 1359310 | ![]() | C_unshiu_01431 | 31518 | 37086 | Hypothetical protein | AGI-03 | 12.606 | ||||||||||
Gn0011 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 24814539 | 24819264 | ![]() | C_unshiu_00341 | 85182 | 89905 | Sucrose synthase | KmG-01 | 21.459 | |||||||||||
Lp0141 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 22386727 | 22388706 | ||||||||||||||||||
Ov0511 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 6101482 | 6103243 | ||||||||||||||||||
Tf0238 | - | - | - | - | - | - | SI114 | ![]() ![]() | scaffold_7 | 551893 | 553909 | ![]() | C_unshiu_01559 | 24035 | 34006 | Receptor-like protein kinase THESEUS 1 | ||||||||||||
Vt0035 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 8510712 | 8514409 | ||||||||||||||||||
Af1055 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 42297979 | 42300281 | ||||||||||||||||||
Af1326 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 43258339 | 43260615 | ||||||||||||||||||
Af1590 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 9348292 | 9351074 | ||||||||||||||||||
Al0328 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 29952005 | 29956306 | ||||||||||||||||||
Cp0012 | O | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44442841 | 44444278 | ||||||||||||||||||
Cp1529 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 4840947 | 4846859 | ||||||||||||||||||
Gn0012 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 46011238 | 46017249 | ![]() | C_unshiu_00139 | 135708 | 141900 | Sucrose synthase | KmG-05S | 78.527 | |||||||||||
Lp0142 | - | - | - | - | - | - | ![]() ![]() | scaffold_4 | 2976873 | 2978308 | ||||||||||||||||||
Tf0240 | - | - | - | - | - | - | SI184 | ![]() ![]() | scaffold_3 | 42718991 | 42733040 | ![]() | C_unshiu_00386 | 164396 | 178993 | Myosin 2 | ||||||||||||
Wy0001 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 3564877 | 3568051 | ||||||||||||||||||
Af1056 | - | - | - | - | - | - | ![]() ![]() | scaffold_2 | 26595972 | 26598955 | ![]() | C_unshiu_00262 | 84573 | 87520 | Purple acid phosphatase 3 | AGI-06 | 66.320 | |||||||||||
Af1327 | - | - | - | - | - | - | ![]() ![]() | scaffold_9 | 29498595 | 29499368 | ||||||||||||||||||
Af1591 | - | - | - | - | - | - | ![]() ![]() | scaffold_8 | 23674833 | 23676979 | ||||||||||||||||||
Cp0013 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 44834035 | 44836704 | ||||||||||||||||||
Cp1533 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 4831751 | 4834270 | ![]() | C_unshiu_00768 | 110682 | 113065 | Lil3 protein | AGI-05 | 29.039 | |||||||||||
Gn0014.2 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | ![]() ![]() | scaffold_9 | 29488658 | 29491181 | ![]() | C_unshiu_00056 | 144107 | 146527 | Beta-carotene hydroxylase 1 | ||||||||||||
Ov0513 | OOthers | O | - | - | - | - | - | ![]() ![]() | scaffold_6 | 25349417 | 25351949 | ![]() | C_unshiu_00009 | 325807 | 333424 | Hypothetical protein | AGI-04 | 38.903 | KmG-04 | 5.110 | RP-04 | 60.491 | ||||||
Tf0241 | Bno homozygous cultivar with minor allele | O | - | - | - | - | - | ![]() ![]() | scaffold_8 | 22106872 | 22114471 | ![]() | C_unshiu_00481 | 121975 | 128680 | Zinc finger CCCH domain-containing protein 24 | AGI-08 | 27.618 | ||||||||||
Wy0002 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 18472967 | 18473951 | ||||||||||||||||||
Af1057 | - | - | - | - | - | - | ![]() ![]() | scaffold_5 | 12677414 | 12680761 | ||||||||||||||||||
Af1328 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 39834680 | 39837971 | ||||||||||||||||||
Af1592 | - | - | - | - | - | - | ![]() ![]() | scaffold_3 | 37597624 | 37600961 | ||||||||||||||||||
Al0330 | - | - | - | - | - | - | ![]() ![]() | scaffold_1 | 7455492 | 7457451 | ||||||||||||||||||
Cp0015 | - | - | - | - | - | - |