Data Upload file / Use sample data
Options (Specifying multiple options may produce unexpected results, so please verify your results.) -m Algorithm
0: enumeration method [slow]
1: branch and bound [fast] (default)
2: greedy algorithm
Use when a timeout occurs in -m1 (default) mode. It is not guaranteed to be the minimal marker set and to output all minimal marker sets. However, it outputs a sufficiently small number of marker sets that identify all the cultivars in a short time. -w Number of markers identifying all 2-cultivar combinations 1: (default)
2:
In the minimal marker set, for any combination of two cultivars in a given genotype table, the marker set is organized so that there is at least one marker that identifies the two cultivars. This "at least one marker" can be changed to "at least two markers" by setting -w2 . 2 or more can also be specified. n: (max: 5)
-g Ignore order of characters (default: '-g') When '-g' is turned on, genotypes 'AB' and 'BA' are considered to be the same genotype. Not case sensitive, but case-sensitive is preferable to avoid unexpected errors.
-b 1: Bitwise operation [fast] (default)
0: arithmetic operation [slow] -k Replace a missing value (default: none) '#' is used when genotypes has a missing value. It is not guaranteed to be the minimal marker set and to output all minimal marker sets. -v Identify specified cultivar(s) from other cultivars
Outputs minimal marker set(s) to identify specified cultivars and other cultivars 3 or 3,4 )-s Number of markers start searching (default: 1, max: 30) -n Specify the marker(s) the user wants to use
Outputs a minimum marker set(s) that includes the specified marker(s) 3 or 3,4 )-l Specifies the number of outputs of the minimum marker set
By default, MinimalMarker does not stop analyzing until all minimal marker sets are detected. However, if the computation time becomes too long, it times out. To avoid this, specify the number of output minimal marker sets. 10 )-p Print data table / Search (default: Search)